Scomber japonicus (chub mackerel): 128369769
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Entry
128369769 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128369769
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128369769
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-ANAPC11
Prok-RING_4
WDCP
Gp58
LMBR1
Motif
Other DBs
NCBI-GeneID:
128369769
NCBI-ProteinID:
XP_053186821
LinkDB
All DBs
Position
12:31835397..31837085
Genome browser
AA seq
562 aa
AA seq
DB search
MAHQGAQLDGAKFCCSICLDLLKDPVAIPCGHSYCMSCINNFWDEEEEKEIYSCPQCRQT
FTPRPVLMKNTMLADLMEELKKTGLQAAAADHCYAEHEDVACDVCTGRKLKAFKSCLVCL
VSYCEKHLQPHYESAAFDKHKLVDPLEKLQENICSRHDEVMKMFCRTDQQIICYLCSVDE
HKGHNTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVKAISRSADKAVEDSE
KIFTELIHLIQKRSSDVKQQIRSQQETEVSRVKELQEKLQQEITELKRKDAELKQFSHTE
DHNQFLHNYPSVSQLSEPKDSSSINIRPLRYFEDVTAAVSELRDKLQDILKEKWTNISLT
VTAVDVLLPQPEPKTRAGFLKYACEITLDPNTAYSYVLLSEGNRKATSVLHKHTYSSHPD
RFTGCDQVLSRESLTGHCYWEVEWSGRRVDVAVAYKNISRAGGLNQCGFGLNDKSWALRC
DNNSHTFLFNSVSTPVSGPVSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTEPLYA
GLWLYYEGGGSTAEFCGQVNLG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcaaggagctcagctggacggagctaaattctgctgttcgatctgtttggat
ttactgaaggatccagtggctattccctgtggacacagctactgcatgagctgtattaac
aacttctgggatgaagaagaagagaaggaaatctacagctgtcctcagtgcagacagacc
tttacaccgaggcctgtcctcatgaaaaacaccatgttagcagatttaatggaggagctg
aagaagactggactccaagctgctgctgctgatcactgctatgctgaacatgaagatgtg
gcctgtgatgtctgtactgggaggaagctgaaagccttcaagtcctgtctggtgtgtctc
gtctcatactgtgagaaacacctccagcctcattatgaatctgctgcatttgacaaacac
aagttggtcgaccctttggagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgtcggactgatcagcagataatctgttatctctgctctgtggatgaa
cataaaggccacaacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtgaaggccatcagtcgctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccatctcatccagaaaagaagctctgatgtgaagcaacag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctgcag
caggagatcactgagctgaagaggaaagacgctgaactgaagcagttctcacacacagag
gatcacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctaaagac
tcatccagcatcaatatccgtcctctgagatactttgaggatgtgacagcagctgtgtct
gagctcagagataaactacaggacatcctgaaggagaaatggacaaacatctcactgaca
gtaactgcagtggacgttttactgccacaaccagaacccaagaccagagctggattctta
aaatatgcatgtgaaatcacactggatccaaacactgcatactcatatgtgttattatct
gaggggaacaggaaagcaacatccgtgcttcataaacacacttattctagtcatccagac
agattcactggatgtgatcaggtcctgagtagagagagtctgaccggacattgttactgg
gaggtggagtggagcgggagaagagttgatgtagcagtcgcatacaagaatatcagcaga
gcaggaggcttgaatcaatgtggatttggactcaatgacaaatcttgggctttaagatgt
gacaataacagtcatacatttctatttaacagtgtctcaactcccgtctcaggtcctgtt
tcctccagagtcggagtttacctggatcacagagcaggtattctgtccttctacagtgtc
tctgaaaccatgactctcctccacagagtccagaccacatttactgagcctctctatgct
ggactttggctttattatgaaggaggtggaagtactgctgagttctgtggtcaagttaac
ctgggatag
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