Scomber japonicus (chub mackerel): 128369815
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Entry
128369815 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128369815
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128369815
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
CCDC47
zf-RING_11
MRP-S31
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
128369815
NCBI-ProteinID:
XP_053186866
LinkDB
All DBs
Position
12:complement(33900307..33901992)
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AA seq
561 aa
AA seq
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MAQKEDHLDQETFSCSICLDLLNDPVTVPCGHSYCMSCIKGFWDREDQMKIYSCPQCRQI
FRPKPVLVKNTMFAALVEQLKKTGLQAAPADLCYAGPEDVACDVCTGRKRKAFKSCLTCL
ASYCENHLQHHYDAAPLKKHKLMEPSKKLQENICSRHDEVMKMFCRTDQQIICYLCSVDE
HKGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKVVEDNE
KISTQLIRLIQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHTE
DHNQFLHNYPSVSQLSEPTDSSSINIRPLSYFEDVTAAVSELRDKLQDILKEEWTNISLT
ETEVDVLLPEPEPEPEPKTTAEFLKYSCEIILDPNTANSRLVLSEGNRKAVVKSQKQCYS
NNPDRFIECTQVLSKESLTGRCYWEVEWGGEGVEVAVAYKNISRDGDMCESGFGGNDQSW
MLCCDSDGLEFWFDCKSTALSGPLPSRIGVYLDHSAGILSFYSISETMTLLHRIQTTFTQ
PLYAGLGLHYNGDKAELCKLK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaagaagatcatctggaccaggaaaccttttcttgttcaatttgtctggat
ctactgaacgatccggtgaccgttccttgtggacacagctactgtatgagctgtattaag
ggattctgggatagagaagatcagatgaagatctacagctgccctcagtgcagacagatc
ttcagaccgaagcctgtcctggtgaaaaacaccatgtttgcagctttagtggagcagctg
aagaagactggactccaagctgctcctgctgatctctgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaagaggaaagccttcaagtcctgtctgacttgtctg
gcttcttactgtgagaatcacctccagcatcattatgatgcagctccattaaagaaacac
aagctgatggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgtcgtactgatcaacagataatctgttatctttgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctt
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccgtcagtcgctctgctgataaagtagtggaagacaatgag
aagatctccactcagctgatccgtctcatccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctgcag
caggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagac
tcatccagcatcaatatccgtcctctgagctactttgaggatgtgacagcagctgtgtca
gagctcagagataaactacaggacatcctgaaggaggaatggacaaacatctcactgaca
gagacagaagtggacgttttactgccagaaccagaaccagaaccagagcccaagaccaca
gctgagttcttaaaatattcatgtgaaatcattctggatccaaacacagcaaactcacgg
ctggtattatctgaggggaacagaaaagcagtagtaaagagccaaaaacagtgttattct
aataatccagacagattcattgaatgtactcaggtcctgagcaaagagagtctgactgga
cgttgttactgggaggtggagtggggaggggaaggagttgaagtcgctgtcgcatacaaa
aatatcagcagagatggagacatgtgtgaaagtggatttggaggcaatgaccaatcttgg
atgttatgttgtgacagtgacggtttggaattttggttcgactgtaaaagcacagctctc
tcaggtcctctgccctccagaatcggagtgtacctggatcacagtgcaggtattctgtcc
ttctacagcatctctgaaaccatgactctcctccacagaatccagaccacattcactcag
cctctctatgctggacttgggcttcattataatggagacaaagctgagttgtgtaaactc
aaatag
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