Scomber japonicus (chub mackerel): 128371574
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Entry
128371574 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128371574
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128371574
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
SPRY
zf-RING_10
zf-ANAPC11
zf-RING_6
UvrD-helicase
WDCP
MRP-S31
Motif
Other DBs
NCBI-GeneID:
128371574
NCBI-ProteinID:
XP_053187901
LinkDB
All DBs
Position
13:6510931..6512717
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AA seq
530 aa
AA seq
DB search
MAEKGDQLDRETFSCSICLDLLKDPVAIPCGHSYCMSCIKNFWDEEDEKKIHTCPQCRQT
FTPRPVLGKNTMLAALVEQLKKTGLQAAPADHYYAGPEDVACDFCTGKKLKAFKSCLNCP
ASYCEKHLQPHYDVAPFKKHKLVEPSKTLEEKICSRHDEVMKIFCRTDQQIICSLCFMDE
HKGHDTVSVAAERTERQRELETSRQNIQQRIQDREKDVKLLQKEVEAVGRSADKAVEDSE
KIFTQLIRLIQKRSSDVKQQIRSQQETEVSRVKELQEKLQQEITELKRKDAELKQLSHTE
DHNQFLHNYPSLSQLSEPTDSSSIDVRPLRYFEDVTAAVSELRDKLQDILTEKWTDISLT
VTEVDVLLSQPEPKTRAGLLKYSCEITLDPNTANTWLLLSERNRKATNISKEQSYSSHPD
RFTGCWQVLSNDSLTGRCYWEVELSGIGVYVAVAYKNISRVGYSNECRFGGPQSSRVGVY
LDHTAGILSFYSVSETMTLLHRVQTTFTQPLYAGVRLIGAGTTAEFCKVK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaggagatcagctggaccgagaaaccttctcttgttcgatctgtctggat
ctactgaaggatccagtggctattccctgtggacacagctactgcatgagctgtattaaa
aacttctgggatgaagaggatgagaagaaaattcacacctgtcctcagtgcaggcagacc
ttcacaccgaggcctgtcctgggtaaaaacaccatgttagcagctttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactactatgctggacctgaagatgtg
gcctgtgatttctgcactgggaagaagctgaaagccttcaaatcttgtctgaattgtcca
gcctcttactgtgagaaacacctccagcctcattatgatgtagctccatttaagaaacac
aagctggtcgaaccctccaaaacactcgaggagaaaatctgctctcgccatgatgaggtg
atgaagattttctgccgtactgatcagcagattatctgttctctttgcttcatggatgaa
cataaaggccatgacacagtctcagttgcagcagaaaggactgagaggcagagagagctc
gagactagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaaaaggaggtggaggccgtcggccgctctgctgacaaagcagtggaggacagtgag
aagatcttcacccagctgatccgtctcatccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctgcag
caggagatcactgagctgaagaggaaagacgctgaactgaagcaactctcacacacagag
gatcacaatcagtttctacacaactacccctcactgtcacaactcagtgaacctacagat
tcatccagcatcgatgtccgtcctctgagatactttgaggatgtgacagcagctgtgtca
gagctcagagataaactacaggacatcctgacagagaaatggacagacatctcactgaca
gtcactgaagtggacgttttactgtcacaaccagagcccaagaccagagctggactttta
aaatattcatgtgaaatcacactggatccaaacactgcaaacacatggttattattatct
gagaggaacagaaaagcaacaaacattagtaaagaacagtcttactctagtcacccagac
agattcactggatgttggcaggtcctgagtaatgacagtctgactggacgctgttactgg
gaggtggagttgagcgggataggagtttatgtagcagtcgcatacaagaatatcagcaga
gtaggatactcaaatgaatgtagatttggaggtcctcagtcctccagagtcggagtgtac
ctggatcacacagcaggtattctgtccttctacagcgtctctgaaaccatgactctcctc
cacagagtccagaccacattcactcagcctctctatgctggagttaggctgattggtgct
ggaaccacagctgagttctgtaaagtcaaatag
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