Scomber japonicus (chub mackerel): 128371766
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Entry
128371766 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128371766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128371766
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128371766
BRITE hierarchy
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
128371766
NCBI-ProteinID:
XP_053188120
LinkDB
All DBs
Position
13:2884968..2901385
Genome browser
AA seq
804 aa
AA seq
DB search
MKQSVYGRSFDDNEEQHPRLLSRSPKIPVTTSKESTXSGGKRKRKIQLLPSHPDNHIALP
PPPELGYTITAKDLDEEKRAAISKIQKVLETPAPEPEKSASLPTSTSTQPELSTTSAPKT
TFTSSSSTTLSSLLAAPLPTASSAAIPVINLDPSPVSSSSSSSSVSAAPAASNPLLEALK
MKSSIXASSTPAASTTTVSAVTTPVQPSSLNLQTTATVNPLGLPPPYQSQSQPQTSSSTG
GEQPSAFTQVLAQVSKPPSSTPSAAGLFGLLSQTSTPTAFTASNPVTAASAAAPISSSNA
PISTSYTSTANPLLSSGFKPIFSVTTSTSSSSAAPPQRANPLSRISSPSLRARTAGGGFG
QPSSLTTTNPSSTVSSSSTPSMFGLTSSXTVAPSAFPGLANTLTGTPSSSSSSSSVTTSA
SQPDAVKSLFGNWPAPSTTSTSSAPATGSTFQFGAATTTPAAAAAAAATTTSTSSNFSFG
GAQPDPQAANPKGFTFGQTAPSQNTTTASFGGFGMANTAPTTVAPSTQSTFAFGKQSFEA
PATQSTFSSTAAQPKPFSFGGGAATSTPASNPAPAPGPFNFGAPAAATTASTFGAPAATT
ASTFGAPAATTASTFGAPAATTASSFGTPAKPTFGATSTGFSFGGTTAPSAAPTAAPAAA
PPSFGGAAQTQSSASATFTFGGAAPPQQAPPPGPAQPAPGGFNFGGAGMPRPQFGTPVAS
NPATQMGGFNFGAADKPAFGTSTPSFGQSTPGPIPFGSPGTPVQGFNAVPFGSPATPSFS
IGAGSKPSGARQRLQARRQHNRKK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagagcgtttatggccgaagcttcgacgataatgaggaacaacatcctcgtctg
ttatcacgcagtcccaagatcccagtcactacctcaaaggaatctactngtagtggtggg
aagaggaaacggaagatccagctgctcccgagtcacccggacaaccacatcgctctgcct
ccacctccagagctcggctacaccatcactgcaaaagatctcgatgaagagaaacgagcc
gccatcagcaagatccagaaagtcctggagacgcctgctccagagccagagaagtccgcc
tctctcccaacctccacttctactcagcccgagttatcaaccacatctgcccctaaaacc
accttcaccagcagcagcagcaccaccctgagtagccttctggcagctcctctgcccaca
gcctccagcgctgccatcccagtcatcaacctggatccaagcccggtcagcagcagcagc
agcagtagcagtgtcagcgcggctcctgcagcctccaacccgctgctggaggctctgaag
atgaagagtagcatcncagcgagctccacacctgctgccagcactacgacagtgtctgca
gtcaccacaccggtgcagccgagcagtttaaacctgcagacgacggccacagtgaacccc
ttagggctccctcctccctaccagtcccagtcccagccccagacctcctcctctactggt
ggggagcagccctctgcctttactcaggtgctggcccaggtctccaaacctcccagcagc
accccgtctgcagcaggcctgtttggtcttctgagccagacgagcaccccgactgctttc
acagcgtctaaccccgtcactgctgcgtccgctgctgctccgatcagcagctccaacgca
cccatcagcaccagttacaccagtacggccaaccctctgctgtcttcagggttcaagccc
atcttctccgtcaccacctccacttcctcctcctcagctgctccgcctcagagagcaaac
ccgctgtccagaatttcaagcccatctttgcgagcacggacggcgggcggaggcttcggg
cagccgtcgtccctgacaaccaccaacccgtcgtctacggtttcctccagtagtacgccc
tcgatgttcggcttgacaagcagcnacacagttgcaccgtcagctttccccggcttggcc
aacaccctaaccggaactccctcctcctcctccagcagcagctccgtcaccacctccgcc
tcgcaacccgacgctgttaaatccctcttcggaaactggcccgctccgtcaaccacgagt
acgagctctgcaccggctacaggaagcacatttcaatttggagctgctacaactacgcct
gcagccgccgccgctgctgctgctaccacgacctccaccagctccaatttctcattcggt
ggagctcagccggaccctcaagcagctaacccgaagggattcacgtttgggcagactgca
ccgagccagaacacgaccacggcttcatttggaggcttcggcatggccaatacagcaccc
actaccgtcgccccctccacccaatccaccttcgcctttggaaagcagtcatttgaagct
ccggcaactcagtccaccttcagctccacagcagctcagccgaagccgttctcctttgga
ggcggagcagccacctccacgcctgcctctaaccccgccccggcccccggtcctttcaat
ttcggagcacctgccgccgccaccacagcgtccactttcggagcacctgctgcaaccaca
gcatccactttcggagcacctgctgccaccacagcatccactttcggagcacctgctgcc
accacagcatccagcttcgggactccagctaaaccaacattcggagccacctctactggt
tttagcttcggaggcaccactgctccgtcggccgctcccacagctgctcccgccgccgct
cctccgagtttcggtggagcggctcagactcagagctccgcctcagctactttcacgttt
ggaggtgcagctcctcctcagcaggctccgccccccggacctgctcagccagcacccgga
ggatttaactttggtggtgctggtatgccgcggccccagtttggaacaccggtcgcaagt
aatcctgcaacacaaatgggaggattcaactttggggctgctgacaaaccagcttttggg
acgtccacgccatccttcggccagagcacccctggtccgatccccttcggaagtcctgga
actccagtccaaggcttcaacgctgttcctttcgggtctcctgcgactccctccttctcc
atcggtgccggatcgaagccgtctggagctcggcagaggctgcaggcgcggcggcaacac
aacaggaagaagtaa
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