Scomber japonicus (chub mackerel): 128371794
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Entry
128371794 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128371794
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128371794
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-B_box
zf-RING_2
U-box
zf-RING_5
zf-RING_10
Prok-RING_4
zf-RING_6
Gp58
MRP-S31
DUF5713
Motif
Other DBs
NCBI-GeneID:
128371794
NCBI-ProteinID:
XP_053188143
LinkDB
All DBs
Position
13:6513823..6515484
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AA seq
553 aa
AA seq
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MAGKGDQLDQETFSCSICLDLLKDPVTIPCGHSYCMSCIRNFWDQQDEKKIHSCPQCRQT
FTPRPVLGKNTMLTALVEQLKKTGLQAAPADHCYAGPEDVACDFCIGRKLKAFKSCLNCP
ASYCEKHLQPHYDVAPLKKHNLVEPSKTLKKNICSCHDEVMKTVCRTDQQSICCLCSVDE
HKGHDTVSAEAERTERQRELEVSRQNIQQRIQDREKDVKLLQQEAEAISRSVDKAVEDSE
KIFTELIHLIQKRSSDVKQQIRSQQETEVSRVNELQEKLQQEITELKKKDVELKQLSYTE
DHNQFLQNYPSLSQLSEATGSSSIDIRPLRYFEDVTAAVSELRDKLQDILTEKWTDISLT
VTEVDVLLPQPEPKTRAEFLKYSCEVTVDPNTAHTRLLLSEGNRNVRKNSKKQCYSSHPD
RFSGWTQVLSRESLTGRCYWEVEWSGKGVRVAVAYKNISRTGIKFGHNDKSWALDCDKHT
HKFWFNNISTPVSGPRSSIVGVYLDHTAGILSFYSVSETTTLLHRVQTTFTQPLYAGVWL
FDFGDTAEFCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaaaggagatcagctggaccaggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgagctgtattaga
aacttctgggatcaacaggatgagaagaaaatccacagctgccctcagtgcaggcagacc
ttcacaccgaggcctgtcctgggtaaaaacaccatgttaacagctttagtggaacagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatttctgcattgggaggaaacttaaagccttcaaatcttgtctgaattgtcca
gcctcttattgtgagaaacacctccagcctcactatgatgtagctccattgaagaaacac
aatctggttgaaccctccaaaacactcaagaagaacatctgctcttgtcatgatgaggtg
atgaagactgtctgccgtactgatcagcagagtatctgttgtctctgctctgtggatgaa
cataaaggccatgacacagtctcagctgaagcagaaagaactgagaggcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggcggaggccatcagtcgctctgttgataaagcagtggaggacagtgag
aagatcttcactgagctgatccatctcatccagaaaagaagctctgatgtgaagcaacag
atcagatcccagcaggaaactgaagtgagtcgagtcaacgaacttcaggagaagctgcag
caggagatcactgagctgaagaagaaagatgttgaactgaagcaactctcatacacagag
gatcacaaccagtttctacagaactacccctcactgtcacaactcagtgaagctacaggc
tcatccagcatcgatatccgtcctctgagatactttgaggatgtgacagcagctgtgtca
gagctcagagataaactacaggacatcctgacagagaaatggacagacatctcactgaca
gtcactgaagtggacgttttactgccacaaccagagcccaagaccagagctgagttctta
aaatattcatgtgaagtcacagtggatccaaacactgcacacacacggcttttattgtct
gaggggaatagaaatgtaagaaaaaatagtaaaaaacagtgttattctagtcacccagac
agattcagtggatggactcaggtcctgagtagggagagtctgactggacgttgttactgg
gaggtggagtggagcggaaaaggagttcgtgtagcagtcgcatacaagaatatcagcaga
acagggattaaatttggacacaatgacaaatcttgggctttagattgtgacaaacacact
cataaattttggttcaacaacatctcaactcccgtctcaggccctcgttcctccatagtc
ggagtgtacctggatcacacagcaggtattctgtccttctacagcgtctctgaaaccacg
actctcctccacagagtccagaccacattcactcagcctctctatgctggagtttggctt
tttgattttggagacacagctgagttctgtaaactcaaatag
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