Scomber japonicus (chub mackerel): 128374689
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Entry
128374689 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128374689
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128374689
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
U-box
Prok-RING_4
UvrD-helicase
WDCP
zf-RING_11
MRP-S31
DUF5486
Motif
Other DBs
NCBI-GeneID:
128374689
NCBI-ProteinID:
XP_053190921
LinkDB
All DBs
Position
15:complement(4720057..4721733)
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AA seq
558 aa
AA seq
DB search
MEQKNQLDQETISCSICLDLLKDPVTIPCGHSYCMSCIKGFWDAEDQRKIYSCPQCREAF
TPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAIKSCLQCLV
SYCENHLQSHLESTKLKKHKLVEPSEKLQENICSRHDEVMKIFCRTDKKCICYLCTMDEH
KGHDTVPAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADEAVEDSEK
TFTQLIRLLQKRSSDVKQQIRSQQETEMRRVKELQEKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILKDKWTNISRSV
TEVDVLLSEPEPEPEPKIRADFLKYSREITLDPNTANTRLLLSDGNRKVTYTLQQQSYSR
LHTDRFTEYPQVLSRESLTGRCYWEVEWGGAMVFVAVAYKNINRAGRESVFGRNDKSWSL
DCYTNRYDFWFNNIQTPVSGPVSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPL
YAGLYVGYESTAVLCKLK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaaaaatcagctggaccaagaaacaatcagctgttcgatctgtctggatcta
ctgaaggatccggtgactattccttgtggacacagctactgcatgagctgtattaaagga
ttctgggatgcagaggatcagaggaagatctacagctgccctcagtgcagagaggccttc
acaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgcactgggaggaagctgaaagccatcaagtcctgtctgcagtgtctggtc
tcttactgtgagaatcacctccagtctcaccttgaatcaaccaaattaaagaaacacaag
ctggtggagccctcggagaagctccaggagaacatctgctctcgtcatgatgaggtgatg
aagatattctgccgtacagataagaagtgtatctgttatctgtgcactatggatgaacat
aaaggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaagtggaggccgtcagtcgctctgctgatgaagcagtggaggacagtgagaag
accttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaaatgagacgagtcaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctgagatactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacatcctgaaggacaaatggacaaatatctcacggtcagta
actgaagtggatgttttactgtcagaaccagaaccagaaccagagcccaagatcagagct
gatttcttaaaatattcacgtgaaatcactctggatccaaacacagcaaacacacggctg
ttattatctgatgggaacagaaaagtaacatatacgttacaacaacagtcttattctagg
ttgcacacagacagattcactgagtatcctcaggtcctgagtagagagtctctgactgga
cgttgttactgggaggtggagtggggaggagcaatggtttttgtagcagtcgcatacaag
aatatcaacagagcaggacgtgaatctgtatttggacgaaatgacaaatcctggtcttta
gattgttacactaacaggtatgacttttggttcaacaacattcaaactcccgtctcaggt
cccgtttcctccagagtcggagtgtacctggatcacagagcaggtattctgtccttctac
agcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctc
tatgctggactttatgttggttatgaatccacagctgtgttgtgtaaactgaaatag
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integrated database retrieval system
