Scomber japonicus (chub mackerel): 128375595
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Entry
128375595 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128375595
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128375595
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
U-box
TRAF3_RING
zf-RING_6
MRP-S31
UvrD-helicase
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128375595
NCBI-ProteinID:
XP_053191959
LinkDB
All DBs
Position
16:944916..946816
Genome browser
AA seq
556 aa
AA seq
DB search
MAQNDQLDRDSFSCSICLDLLKDPVTTSCGHSYCMSCIKGFWDGEDQRKIYSCPQCREAF
TPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAFKSCLQCLI
SYCENHLQSHFESTKLKKHKLVEPSEKLQENICSRHDEVMKIFCRTDKKCICYLCTMEDH
KGHDTVPAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVEDSEK
IFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKVLQEKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSKLRDKLQDILRDKWTNISLRG
TEVDVLLSEPEPKTRAEFLRYSCEITLDPNTVHAHLLLSEGNRNVKCTLLQQSYSSHRDR
FTDWWQVLSRESLTGRCYWEVEWRGSRWGGVHVAVAYKSISRAGDESLFGRNDKSWSLYC
STNRYELWFNNSKTCVSGPGSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYA
GLWVHDGSTAELCKVK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaacgatcagctggaccgagactcattcagctgttcgatctgtctggatcta
ctaaaggatccggtgactacttcctgtggacacagctactgtatgagctgtattaaagga
ttctgggatggagaggatcagaggaagatctacagctgccctcagtgcagagaggccttc
acaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtctgcagtgtctgatc
tcttactgtgagaatcacctccagtctcactttgaatcaaccaagttaaagaaacacaag
ctggtggagccctcggagaagctccaggagaacatctgctctcgtcatgatgaggtgatg
aagatattctgccgtacagataagaagtgtatctgttatctgtgcactatggaggatcat
aaaggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacagtgagaag
atcttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagtgcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctcagatactttgaggatgtgacagcagctgtgtcaaag
ctcagagataaactacaggacatcctgagggacaaatggacaaatatctcactgagaggg
actgaagtggacgttttactgtcagaaccagaacccaagaccagagctgagttcttaaga
tattcatgtgaaatcactctggatccaaacacagtacacgcacatctgttattatctgag
gggaacagaaatgtaaaatgtacgttactacaacagtcttattctagtcacagagacaga
ttcactgattggtggcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagtggagaggaagcagatggggaggagttcatgtagcagttgcatacaagagtatc
agcagagcaggagatgaatctctctttggacgtaatgacaaatcttggtctttatattgt
tccactaacaggtatgaactttggttcaacaatagtaaaacttgcgtctcaggtcctggt
tcctccagagtcggagtgtacctggatcacagagcaggtattctgtccttctacagcgtc
tctgaaaccatgaccctcctccacagagtccagaccacattcactcagcctctctatgct
ggactttgggttcatgatggatccacagctgagttgtgtaaagtgaaatag
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integrated database retrieval system
