Scomber japonicus (chub mackerel): 128377176
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Entry
128377176 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128377176
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128377176
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-RING_2
Fib_alpha
zf-RING_5
Prok-RING_4
UvrD-helicase
MRP-S31
zf-RING_11
DUF4715
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
128377176
NCBI-ProteinID:
XP_053193062
LinkDB
All DBs
Position
17:3683782..3687734
Genome browser
AA seq
558 aa
AA seq
DB search
MAQKGVQLDQEAFCCSICLDLLKDPVTIPCGHSYCMSCIKGFWDGEDQSKICCPQCRQTF
APRPVLGKNTILAALVEQLKKTGHQAAPADHCYAGPEDVACDVCTGRKLKALKSCLTCLI
SYCEKHLQPHYTVGQFKKHKLVDPSKTLQENICSRHDEVMKMFCRTDQQSICYLCSVDEH
KGHDTVPAAAERTERQRELEVSRLNIQQRIQHREKDVKLLQQEVEAVSRSADKAVEDNEK
IFTELIRLLQKRSSDVKQQIRSQQETGISRVKELQEKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSETTDSSSINIRPLRYFEDVTAAVSELRDKLQDILRDKWTNISLTG
REMDVLLSEPEPEPKTRAEFLQYSCEITLDPNTANTELLLSEGNRKATYTSQQQSYSSHP
DRFTGWCQVLSRESLTGRCYWEVDWRGREFRIAVAYKNISRIGGSNECGFGFNDKSWMLV
CYTTGYDFYFNNIRTPISGPHSSRVGVYLDHRAGILSFYRVSGTMTLLHRVQTTFTQPLY
AGLHLLYDGVTTELCKLK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctcgaccaagaagccttctgttgttcaatctgtttggat
ctactgaaggatccagtcactattccctgtggacacagctactgtatgagctgtattaaa
ggattctgggatggagaggatcagagtaagatctgttgccctcaatgcagacagaccttt
gcaccgaggcctgtcttggggaaaaacaccattttagcagctttagtggagcagctgaag
aagactggacaccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgcactgggaggaagctgaaagccctcaagtcctgtctgacgtgtctgatc
tcttactgtgagaaacacctccagcctcattacactgttggtcaatttaaaaaacacaag
ttggttgacccctccaagacgcttcaggagaacatctgctctcgtcatgatgaggtgatg
aagatgttctgtcgtactgatcagcagagtatctgttatctctgctctgtggatgaacat
aaaggccacgatacagtcccagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcaaagaatccagcacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacaatgagaag
atcttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactggaataagccgagtgaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaaactacagactca
tccagcatcaatatccgtcctctgagatactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacatcctgagggacaaatggacaaacatctcactgacaggg
agagaaatggatgttttactgtctgaaccagaaccagagcccaagaccagagctgagttc
ttacaatattcatgtgaaatcactctggatccaaacacagcaaacacagagctgttatta
tctgaggggaaccgaaaagcaacatatacgagtcaacaacagtcttactctagtcaccca
gacagattcactggatggtgtcaggtcctgagtagagagagtctgactggacgttgttac
tgggaggtggactggagagggagagaatttcgtatagcagttgcatacaagaatatcagc
agaatagggggctcaaatgaatgtggattcggatttaatgacaaatcttggatgttagtc
tgttacacgactggctatgacttttatttcaacaacatcagaacccccatctcaggtcct
cattcctccagagtcggagtgtacctggatcacagagcaggtattctgtccttctacaga
gtctctggaaccatgactctcctccacagagtccagaccacattcactcagcctctctat
gctggacttcatcttctttatgatggagtcacaactgagttgtgtaaactcaaatag
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