Scomber japonicus (chub mackerel): 128377187
Help
Entry
128377187 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128377187
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128377187
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
Prok-RING_4
zf-RING_5
zf-RING_11
UvrD-helicase
MRP-S31
Gp58
Motif
Other DBs
NCBI-GeneID:
128377187
NCBI-ProteinID:
XP_053193076
LinkDB
All DBs
Position
17:3690085..3691770
Genome browser
AA seq
556 aa
AA seq
DB search
MAQKGVQLDQEAFCCSICLDLLKDPVTIPCGHSYCMSCIKGFWDGEDQSKICCPQCRKTF
APRPFLGKNTILAALVEQLKKTGLQAAPADHCYSGREDVACDVCTGRKLKAFKSCLQCLI
SYCENHLQPHYTIGQFKKHQLVEPSEKLQENICSRHDEVMKIFCRTDQQSICYLCSVDEH
KGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSHSADKAVEDNEK
IFTQLIRLLQKRSSDVKQQIRSQQETEVSRVKELQEKLQQEITELKRKDAELKKLSHTED
HNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSKLRDKLQDILRDKWTNISQAV
TEVDVLLSEPEPKTRAEFLQYSCEIYLDPNTAHTNLLLSEGNRKAEAVRQKQSYSSHPDR
FTIRRQVLSRESLTGRCYWEVDWRGTEFRIAVAYKNISRVGSSNECAFGFSDKSWMLICS
MTCYVFWFNSISTPVSGPVSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAG
LWVYNDGVTAELRKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctcgaccaagaagccttctgttgttcaatctgtttggat
ctactgaaggatccagtgactattccctgtggacacagctactgtatgagctgtattaaa
ggattctgggatggagaggatcagagtaagatctgctgccctcagtgcagaaagaccttt
gcaccgaggcctttcctggggaaaaacaccattttagctgctttagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctattctggacgtgaagatgtggcc
tgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtctgcagtgtctgatc
tcttactgtgagaatcacctccagcctcattacactattggtcaatttaaaaaacaccaa
ctggtggagccctcggagaagctccaggagaacatctgctctcgtcatgatgaggtgatg
aagatattctgtcgtactgatcagcagagtatctgttatctgtgctctgtggatgaacat
aaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtcactctgctgataaagcagtggaggacaatgagaag
atcttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagaagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctgagatactttgaggatgtgacagcagctgtgtcaaag
ctcagagataaactacaggacatcctgagggacaaatggacaaacatctcacaggcagtg
actgaagtggacgtattattgtcagaaccagagcccaagaccagagctgagttcttacaa
tattcatgtgaaatctatctggatccaaacacagcacacacaaatttgttattatcagaa
gggaacagaaaagcagaagcagtgagacaaaaacagtcttactctagtcatccagacaga
ttcactatacggcgtcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggactggagagggacagaatttcgtatagcagtcgcatacaagaacatcagcagagta
gggagctcgaatgaatgtgcatttggatttagtgacaaatcttggatgttaatctgttcc
atgacttgttatgtattttggttcaacagcatctcaactcccgtctcaggtcctgtttcc
tccagagtcggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctct
gaaaccatgactctcctccacagagtccagaccacattcactcagcctctctatgctgga
ctttgggtttataatgatggagtcacagctgagctgcgtaaactcaaatag
DBGET
integrated database retrieval system
