Scomber japonicus (chub mackerel): 128377473
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Entry
128377473 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128377473
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128377473
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
FapA
WDCP
LMBR1
UvrD-helicase
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128377473
NCBI-ProteinID:
XP_053193398
LinkDB
All DBs
Position
17:complement(3602187..3603578)
Genome browser
AA seq
463 aa
AA seq
DB search
MAQKGVQLDRQTFCCSICLDLLNDPVGLSCGHSYCMSCIEKHWDGEDKRRMYSCPDCRQT
FTQRPVLMKNAMLAALVEQLKKTGLQAAPADHGYAGFERQRELEVSRLNIQQRIQDREKD
VKLLLQEVEAISRSADKAVEDSEKIFTQLIRLLQKRSSDVKQQIRSQQETEVNRVTKLQE
KLQQEITELKRKDAELKKLSHTEDHNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVSA
AVSELRDLLQDILRDKWTNISVTETEMDVLLSEPQPEPEPKTRTEFLQYSCDITLDPNTA
HSYLLLSEGNRKVEAMRQQQSYSCHPDRFTNWYQVLSRESLTGRCYWEVDWIGRAVCVAV
AYKNISRRGDSRECRFGFNAKSWMLNCHTNIYNFWFNNIHTPVSNPCSSRVGVYLDHRAG
ILSFYRVSETMTLLHRVQTTFTQPLYAGLCLYYGATAEFCQLK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggacagacaaaccttctgttgttcaatctgtttggat
ctactgaatgatccggtgggtctttcctgtggacacagttactgtatgagctgtattgaa
aaacactgggatggagaggataagaggaggatgtacagctgccctgactgcagacagacc
ttcacacagaggcctgtcctaatgaaaaacgccatgttagcagctttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcacggctatgctggatttgagaggcag
agagagctcgaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagat
gtgaagctgcttctacaggaggtggaggccatcagtcgctctgctgataaagcagtggag
gacagtgagaagatcttcactcagctgatccgactcctccagaaaagaagctctgatgtg
aagcagcagatcagatcccagcaggaaactgaagtgaatcgagtcacaaagcttcaggag
aagctgcagcaggagatcactgagctgaagaggaaagacgctgaactgaagaagctctca
cacacagaggatcacaaccagtttctacacaactacccctcagtgtcacaactcagtgaa
cctacagactcatccagcatcaatatccgtcctctcagatactttgaggatgtgtcagca
gctgtgtcagagctcagagatctactacaggacatcctgagggataaatggacaaacatc
tcagtgacagagactgaaatggacgttttactatcagagccacaaccagaaccagagccc
aagaccagaactgagtttttacaatattcatgtgacatcactctggatccaaacacagca
cactcatatctgttattatcagaagggaacagaaaagtagaagcaatgagacaacaacag
tcttactcttgtcacccagacagattcactaattggtatcaggtcctgagcagagagagc
ctgactggacgttgttactgggaggtggactggataggaagagcagtttgtgtagcagtc
gcatacaagaacatcagcagaaggggagactcaagagaatgtagatttggatttaatgcc
aaatcttggatgttaaattgtcacactaacatttataatttttggttcaacaatattcat
actcctgtctccaatccttgttcctccagagtaggagtgtacctggatcacagagcaggt
attctgtccttctacagagtctctgaaaccatgactctcctccacagagtccagaccaca
ttcactcagcctctctatgctggactttgtctttattatggagccacagctgagttttgt
caactaaaatag
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