Scomber japonicus (chub mackerel): 128378681
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Entry
128378681 CDS
T09718
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
sjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128378681
03015 mRNA surveillance pathway
128378681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128378681
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128378681
BRITE hierarchy
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
128378681
NCBI-ProteinID:
XP_053194224
LinkDB
All DBs
Position
18:complement(24385105..24388420)
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AA seq
280 aa
AA seq
DB search
MAPSPTKRKEEEKTKDRGKEKTSTKDGDKERGREKVRKRRSASTGSSSSRSRSSSTSSSS
SGSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGD
DKERRKRSPSPKPTKVHLGRLTRNVTKEHIQEIFSTYGKIKMVDMAMDRLYPHLSRGYAY
VEFETPEEAQKALKHMDGGQIDGQEITASAVLPQRVRPPPRRPSPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPARRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcggaaggaagaggaaaaaacaaaagacagaggcaaagaa
aagactagtaccaaggatggagacaaggaaagaggacgggagaaagtaaggaaacgccgc
agcgcttctactggcagcagcagcagcaggtccagatctagctctacttcaagcagcagc
tctggttccagctcaggttcctccagtggatccagttcatctgggtccagccgctctggt
tcttctagctctcgttcctcctcttcatccagctcctctggctctcccagtcccagccgc
cgccgccatgacaaccgccgacgctcccgctcagcgtccaaaacacagaagaggggagac
gataaggagagaaggaaaagaagcccaagtcccaaaccaactaaagttcatttggggcgg
ctgaccaggaatgtcaccaaggaacacatccaggagatcttctctacttatgggaaaatc
aagatggttgacatggcaatggacaggctttacccacacctgtccaggggctacgcctat
gtagagtttgagactcctgaggaggcccagaaggccctcaaacacatggacggaggtcag
attgatggacaggaaatcactgcgtcggctgtgctgcctcaacgtgtccgtcctccaccc
cgtagaccctctcctcctcgtagaatgcctccaccaccacctatgtggcgtcgcagccca
ccacgcatgaggagaaggtcccgctccccaaggaggcgatccccagcacgccgccgctct
cgctccagatctcctggtcgtaggcgccaccgctctcgttccagctctaactcctcccga
tag
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