Scomber japonicus (chub mackerel): 128378701
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Entry
128378701 CDS
T09718
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128378701
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128378701
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
128378701
NCBI-ProteinID:
XP_053194253
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All DBs
Position
18:27274113..27398243
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AA seq
379 aa
AA seq
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MRKASRHPMLSSMANSGCLLLSGSGMLPHSLQCPPAFLYLPEGNQEATNPPEAMAQPYTP
AQYPPPPQNGIPAEFAAPHPLPTQDYTGQSRVPEHAMTLYTPTQTHSEPAGTDNSTPAIT
ATTTAPTDDVTQTEGSQQLQLQHSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKIL
DVEIIFNERGSKGFGFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKVANP
YTNGWKLNPVVGAVYGPELYAVTGFPYPATGATVAYRGAHLRGRGRAVYNTFRTAPPPPP
IPAYGAVVYQDGFYGAEIYGGYAAYRFAQPTTTAAYSDSYGRVYATADPYHHTIGPAATY
SVGTMASLYRGGYSRFTPY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagcgtcccgtcaccccatgctgagctccatggccaactccggctgcctgctg
ctctccggctccgggatgctacctcactcgctccagtgtccccctgctttcctctacctg
cccgagggtaaccaagaggccaccaatcccccagaagcgatggcccagccgtacacccca
gcccagtacccccctcccccacagaatggcatccctgcagagttcgcggcgccgcacccg
ctcccgacgcaggactacaccgggcagagccgggttcctgagcacgccatgaccctgtac
actcccacacagacgcacagcgagccggccggcactgacaacagcacgcccgccatcacc
gccaccacgaccgcaccgacagatgacgtgacgcaaacagagggctctcagcagctccag
ctccagcactcagactcttcagagaagcagcagcccaaaaggttacatgtctccaacatt
cccttccgcttccgggaccctgacctaaggcaaatgtttgggcaatttggaaagatttta
gatgtggagattatctttaatgagcgaggatccaagggctttgggtttgtaacttttgaa
acaagcacagatgctgatcgtgcacgggagaaactaaacggtacaatcgtagagggacgc
aaaatagaggtgaacaatgcaacagcacgagtgatgacaaacaaaaaagtggccaaccct
tacacgaatggctggaagctgaatccagtggtaggagctgtctatggtcctgaactgtat
gccgtaacagggtttccctatcctgccacaggcgctacagtggcctataggggtgcccac
ttgcggggtcgggggcgggctgtgtacaacacgttccgcacagctccaccaccgccacca
atcccagcttacggagcggtggtgtaccaagatggcttctatggtgcagagatctatggt
ggatatgcagcatacagatttgcccagcccaccaccaccgctgcttacagtgacagctat
ggcagagtctatgcaacagcagatccctaccaccacacgattggccctgccgccacatac
agtgtggggactatggctagcctatacagaggagggtacagtcgcttcactccctactaa
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