Scomber japonicus (chub mackerel): 128379606
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Entry
128379606 CDS
T09718
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128379606 (rbfox1)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128379606 (rbfox1)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
128379606
NCBI-ProteinID:
XP_053195270
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All DBs
Position
18:1378711..1551376
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AA seq
387 aa
AA seq
DB search
MQHPGGTCVALPNVDACPQLSCAALTFMYLQQGNQDTPAPPDPSMAQAYPSAQFAPPPQN
GIPAEFTASHPHPHPHSHPHPHQHPAAPQDYTGVQPSVTEHPLNMYQSSQSHSEQSGSDS
CSQTVTGTATQTDEASQSDSQPPTQSVPESTDSKAQPKRLHVSNIPFRFRDPDLRQMFGQ
FGKILDVEIIFNERGSKGFGFVTFEHSVDADRAREKLHGTVVEGRKIEVNNATARVMTNK
KTVNPYANGWKLNPVVSAVYSPEFYAVPGFPYPAASAAAAYRGAHLRGRGRTVYNTFRAA
APPPHIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTATTAAAYSDSYGRVYAADPYNHTL
TPAATYSVGAMLLACTPGMKRLAVLAA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcctggaggaacatgcgtggcgttacccaacgtggacgcctgtcctcagctg
tcctgcgccgccctcaccttcatgtatttacagcagggtaaccaggacacaccggcaccc
ccggacccatccatggcccaggcttacccatcagcccagtttgccccaccgccccagaat
ggcattccagctgagttcactgcttcacacccccacccacatccacactcccacccacat
ccacaccagcacccagcggcaccacaagactacactggagttcagccctccgtcactgag
catccactcaacatgtaccagtcctcgcagagccatagcgagcagagcggatcagactcc
tgcagtcagacggtcaccggcacagcaacacagacagatgaagcttcccagtcggacagt
cagccaccaacacagagtgtacctgaaagcacagacagcaaggcccaacccaagagactt
catgtctccaacatccccttcaggtttagagacccagacctcaggcaaatgtttggccaa
tttggcaaaatcttagatgtggaaatcatcttcaatgagcgtggatctaagggtttcggg
ttcgtaacattcgaacatagtgtggacgccgacagggccagagagaaattacacggcacc
gtggtagaaggccgtaaaatagaggtcaacaatgcaactgcccgagtaatgacaaataag
aagactgtcaacccctatgcaaatggctggaagttaaatccagtggtcagcgctgtctat
agcccagaattctatgcagtaccaggttttccctacccagcagccagtgcagcagcagca
tacagaggtgcccacctacgaggtcgaggacgaaccgtgtacaacacattcagggcggct
gctccacctccccacatcccagcttatggaggtgttgtttaccaggatggattttatggt
gcagatatttatggtggttacgctgcctacagatatgcccagcctactgctaccacagct
gctgcatacagtgacagttacggacgagtatatgctgccgacccctacaaccacacactc
actccagcagccacatacagcgttggtgccatgctgttggcatgtacccctggcatgaag
cgtcttgctgtgcttgctgcatga
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