Scomber japonicus (chub mackerel): 128379827
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Entry
128379827 CDS
T09718
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128379827 (cacna1ab)
04020 Calcium signaling pathway
128379827 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128379827 (cacna1ab)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128379827 (cacna1ab)
BRITE hierarchy
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
128379827
NCBI-ProteinID:
XP_053195446
LinkDB
All DBs
Position
2:7936476..8061115
Genome browser
AA seq
2303 aa
AA seq
DB search
MILTTIIANCIVLALEQHLPDGDKTPLSERLEETEPYFIAIFCFESGIKILALGFALHKG
SYLRNGWNVMDFVVVLTGILSSVGSQLDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MIPLLQIGLLLFVAILMFAIIGLEFYMGKFHTTCFDDNGETVDDLPCGTAFPSRVCPNGT
LCRGGWLGPNYGITQFDNILFAVLTVFQCITMEGWTEMLYFSNDVEGSAWNWMYYIPLII
IGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILA
EEDGTVNFDGSRRRPTIKTKNNKTELLNPEEVEDNIGDAVGFARSSIKNGKDGNYSKNER
RMRFFIRKIVKTQAFYWTVLCLVGLNTMCVAVVHYNQPQLLSDFLFYAEFIFLGLFMSEM
LIKMYGLGMTPYFHSSFNCFDCVVIVGSIFEVVWATIKPGTSFGISVLRALRLLRIFKVT
KYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFESGTPPTNFDTF
AAAIMTVFQILTGEDWNMVMYDGIESQGGVNDKGMVFSIFFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEQEEAANQKTALQKAKEVAEVSPLSAANLSIAAKEQQKNHINKGG
SKSVWEQRTSEIRRQNLMTSREALYNELEQEDWKVGEGEEVPFPRKGRGDMKTHLDRPLV
VNPQDNRNNNTNKTQPGELPLDQEYQRQDVDHYRRAAHYYRHHHHHHPKAIAPSNITEQP
GQPMETRMERGFSCTSLGNVAGQQGEERHSHRSHRGHRHRNKEGRETRSVSPRHSERGEG
NNEHRRSRQHRRAAKEGEEGRRHRSRGTEGEGEKGEEGEVRKTRRHRHGNQERSRGHRTR
KEHHSTGPSLSTTRPIQQYNEDLDNFRNNSKLASAHEHPYDLPPDHPDHVNNLLNCRDAD
THTLLHSMDSLILTSMVKPDYTSIDMPPVYPYPSTNAILQVNKNANTDQKKNEEKKEEED
DGGDEDGPKPMPPYSSCFIMSTTNPFRKCCHYILTLKYFEFSILSVIAMSSIALAAEDPV
KPDSPRNNVLKYFDYVFTGVFTFEMLIKMVVLGLFLHQGSYFRDLWNILDFIVVSGALVA
FAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLF
MFIFAVVAVQLFKGRFFCCTDESKEFERDCRGEYLVYDRDEVKAQKREWKKHDFHYDNVA
WALLTLFTVSTGEGWPQVLKHSVDSTYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFV
ALIIITFQEQGDKMMEDYSLEKNERACIDFAINARPLTRHMPKNKLSFQYRMWQFVVSPP
FEYSIMALIALNTIVLMMKFDGASENYNDVLKYLNIVFTTFFFMESSLKIVAFGPLNFFR
DAWNIFDFVSVLGSITDILVTELGNNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQ
SFKALPYVCLLIAMLFFIYAIIGMQLFGNLALDEERENAINEHNNFRTFIMALMLLFRSA
TGEAWHEIMLSCLGGKECDPDSGNTEPECGSTFAYTYFVSFIFLCSFLMLNLFVAVIMDN
FEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRV
ACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPN
LSQKTLDLLVTPHKAATDLTVGKIYAAMMIMEYYRQSKTKKQQALREEQNRTPLMFQLMA
PASEGGGTDGQGGQGLNGLPSTQPDNVNSIPPEGGMTDSQSWVTNKAQEMFQNPGNWSPD
RPYPDDLHDNRHNPQKVEMREMGRDGYSDTEPYHPMDGHGRTLSMPRLSADNQTITDTNP
MRRSTSSLVHGRTGRGVRLDDYSLERVVSEEGRHGGGRRHRGRNHRTPSQPSLTRYTDAD
TGLGTDLSTTTQSGDLPPKERERDRGRTKDRRHHHHHHHHHSSMDKERYGPDRHDYPHRH
PHDHHWSRSPSEGPEGRGHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPAVPRPHVTY
SPAVRKPSYGPPGPGRLRSPSPRHFSPPDHERGYHHRPPSRHGSPHHGGSSSRHGSPRSP
RHQSPRSPLHGSPRSPHRGRWSGPPPGDSLEGDGPFYERDYEYERHHEPPAYEQSLSHGN
PHPHGGNPHPHPRSPRTARHGPPPPPHPHPRRVPNGYRSSSPSPHRRGPPGAPPHPHHRP
PHARGPRKGLHEPYSETDEDDWC
NT seq
6912 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcaccaccatcattgctaactgcatcgtcctggctctggagcagcatcttccc
gacggagacaagacgcctctgtccgaacgactggaggagacggagccctacttcatagcc
atcttctgttttgagtcggggataaagatcctggctctgggttttgcgttacataagggc
tcctacctgagaaacggctggaacgtcatggacttcgtggtcgtgctcaccggtattttg
tcgtcagtggggtctcagcttgacttgaggactctacgagctgtcagagtgcttcgacca
ctgaaactggtgtctgggattcccagcctgcaggtggtgctcaagtccattatgaaggct
atgatccccctgctgcagatcggcctgctgctgttcgtggccatcctcatgttcgccatc
atcggcctggagttttacatggggaagttccacaccacctgcttcgatgataacggagag
acagtggatgatttgccgtgtggtactgcgtttccgtctcgggtgtgtccaaacggcaca
ctgtgtcgaggcggctggcttggacccaactacggcatcacccagttcgacaacatcctg
ttcgccgtgctcaccgtcttccagtgcatcaccatggagggatggacagagatgctctac
ttcagtaatgatgtggagggcagcgcctggaactggatgtactacatccctctcatcatc
atcggctccttcttcatgctcaacctggtgctgggtgtactctcaggtgaatttgccaaa
gagagagagcgagtggagaaccggagcgagttcctcaagctgaggcgacagcagcagatt
gagagagagctcaacggatacctggagtggatctgcaaagcagaggaggtgattctggcg
gaggaagacggcacagtgaactttgatggttcgagacggaggccgaccatcaaaaccaaa
aacaataagaccgaactcctgaatccagaggaagtagaggacaatataggtgatgcagta
ggttttgctcggtctagcataaagaacggtaaagacggcaattacagtaagaatgagcga
cgaatgcgattctttatccgcaagatagtgaagacgcaggctttctattggacggtgctc
tgcctggtgggcctcaacaccatgtgtgtggcggtggtgcactacaaccagccgcagctg
ctgtccgacttcctgttctatgcagagtttatcttcctcggtttgttcatgtctgagatg
ctgatcaagatgtatggtctgggcatgacgccctacttccactcctcattcaactgcttc
gactgtgtggtaattgtgggcagtattttcgaggtagtgtgggccaccatcaaaccaggc
acgtcctttgggatcagtgtgttacgagctctgagacttcttcgcatcttcaaagtcaca
aagtactgggctcctctccgtaacctggtggtttctttgctgaactccatgaagtccatt
atcagtttgctcttcctcctcttcctcttcatcgtggtctttgccttgttggggatgcag
ctgtttggtggacaattcaactttgaaagcgggactccgcccactaactttgacacgttt
gcagcagcgatcatgacagtgtttcagattctcactggagaggactggaacatggtgatg
tacgacggtatcgagtcccaaggaggagtaaacgacaaagggatggttttctccattttc
ttcattgtcctcacgctctttggaaactacactctgcttaacgtcttcttggccatcgcc
gttgacaacctggccaacgcccaggagctcactaaggacgaggaggagcaggaggaggca
gccaatcagaagacggcgctgcagaaagcgaaggaggtggccgaggtcagcccgctgtca
gctgccaacctgtctattgctgcgaaagagcagcagaagaaccacatcaacaagggaggc
agcaagtccgtgtgggagcagaggacgagcgagatccgccgacagaacctgatgacgagc
cgcgaggcgctctacaacgagctggagcaggaagactggaaggtgggggagggagaggag
gttcccttcccacggaaaggacgcggcgatatgaagacccacctggaccggccgctggtg
gtcaacccgcaggacaaccgcaacaataacaccaacaaaacccaacccggtgagctgcct
ctggatcaggaatatcagcggcaggacgtcgaccactaccgccgtgcagcccactactac
cgtcaccatcaccatcaccatccgaaagccatcgcacctagcaacatcaccgagcagccg
ggccagccgatggagacacggatggagcgtggcttcagctgcacgtccctgggtaacgtg
gcgggtcagcaaggtgaagagaggcacagtcacaggagccaccggggccatcggcacagg
aacaaggaaggcagggagactcgcagcgtgtctccgcgccacagcgagaggggagaggga
aacaacgagcacaggaggtccaggcagcaccgcagggcagcgaaagagggggaggagggc
aggagacacagatccaggggcacggagggtgaaggagagaagggcgaagagggagaggtg
aggaagacgagacggcatcgccatggaaaccaagagagaagcagagggcatcgcacgagg
aaggagcaccacagcacaggtccaagcctctccaccacccgacccatacagcagtacaac
gaggacctggacaacttccgcaacaacagcaaactagccagcgctcacgaacacccttat
gaccttccaccagaccacccggaccacgtcaacaacctgctgaactgccgagacgcagac
acccacaccctgctccacagcatggacagcctcatccttaccagcatggtcaaacctgat
tacacaagcatagacatgccccctgtttacccctacccttcaaccaacgccatcctgcaa
gtgaacaagaacgccaacaccgaccagaagaagaacgaggagaagaaggaggaggaagat
gacggaggggatgaagacggccctaaaccgatgcctccatacagctcctgttttataatg
tccaccacaaacccgtttcggaagtgctgccactacatcttgactctgaagtattttgag
ttcagcatcctgtctgtcatcgctatgagcagcatcgccctcgctgcagaggaccctgtc
aagcctgattcaccgcgaaataatgtgctgaaatattttgactacgttttcacaggcgtc
ttcacttttgaaatgttgatcaagatggtggtgctcggcttgtttctccaccagggctcc
tacttccgcgacttgtggaacattctggactttatagtggttagtggtgctctggtggcc
ttcgccttcacggggagcagcaagggcaaagacatcagtacgatcaagtcccttcgtgtg
ctgagggtgctgcgtcctcttaagaccatcaaacgtctccccaaactaaaggctgtgttt
gactgtgtggtcaactctctgaagaacgtgctgaacatcttaattgtctacatgctcttc
atgttcatctttgctgtggtggctgtgcagcttttcaagggccgcttcttctgctgcacg
gacgaatccaaagagtttgagcgcgactgcaggggcgagtacttagtgtatgatagggat
gaggttaaagcgcagaagcgggagtggaagaagcacgatttccactacgacaatgtcgct
tgggccctgctcaccctctttacggtctcgactggagagggatggccgcaggtgttaaag
cactcagtggactccacctatgagaatcagggcccgagcccaggttataggatggaaatg
tccatcttttacgtggtgtacttcgttgtcttccccttcttcttcgttaatatctttgtg
gctctcatcatcatcaccttccaggaacagggggataagatgatggaggactatagttta
gaaaagaatgagagagcttgtatagatttcgccatcaacgccaggcccctgactcgccat
atgccaaaaaacaaactcagcttccagtatcgcatgtggcagttcgtggtgtctccgccc
ttcgagtacagcatcatggctctaatcgcgctcaacaccatcgtcctcatgatgaagttc
gacggtgcttcggaaaactacaacgacgtcctgaagtacctcaacattgtgtttacgacg
ttcttcttcatggaatcaagcctcaagatcgtcgctttcggccctctgaatttcttcaga
gacgcctggaacatttttgattttgtctcagtccttggaagcatcactgacatattagtt
acagagctagggaataacttcatcaacctgagcttcctgaggctgttcagagcagctcgt
ctcatcaagctgctgagacaaggagagacgatccgcatcttactgtggaccttcgttcaa
tccttcaaggctctgccatacgtgtgtctgctcattgccatgctcttcttcatctacgcc
atcattggcatgcagttgtttggtaatctggcactagacgaggagagagagaacgccatc
aacgagcacaataacttcagaaccttcatcatggccctaatgctgctgttcaggagcgct
acaggtgaagcgtggcatgagatcatgttatcgtgcctgggcggtaaagagtgcgaccca
gactcagggaacacagagcccgagtgtggaagcaccttcgcctacacctactttgtctcc
ttcattttcctctgctctttcctgatgctcaatctgtttgtggccgtcatcatggacaac
tttgagtacctgaccagagactcttcgatcctggggccgcatcacctggacgagtatgta
aggatatgggccgagtacgaccctgctgcctgcgggcgcatacattataaggatatgtac
agtttattgcgagttatctcccctcccctgggccttggcaagaaatgcccacatagggtg
gcctgcaagaggctgctacgaatggatctgccggttgcagacgacaacacggtacatttt
aactccaccctcatggcgctgatcaggacagcactggatataaagattgccaagggtggt
gcagacaagcaccaaatggatgcagagctgagaaaggagatgatggcgatttggccaaac
ttatcgcagaagactctggacttgctggtcacaccgcataaggcagccacagacttgacg
gtgggcaaaatctacgccgccatgatgatcatggaatactaccggcagagcaagacgaaa
aagcagcaggccctgcgagaggaacagaaccgaacgccattaatgtttcagctaatggcg
ccggcctcagagggagggggcacggacggccagggggggcagggtctgaacggcctcccc
agcacccagccggacaacgtcaacagcatacctcccgaaggtggcatgactgacagccag
tcgtgggtgacgaacaaagcccaggagatgttccaaaacccgggtaactggagccccgac
agaccctaccctgacgatctccacgacaaccggcacaacccacagaaggtagagatgagg
gagatggggcgggacgggtactccgacactgagccctatcacccaatggatgggcatggg
cggaccctctccatgccccgcctctcggcagacaaccaaaccatcacagacaccaatccg
atgcgtcgctccacctccagcctggtccacgggcgcacaggccggggcgtgaggctggac
gactactccctggagagggtggtgtccgaagaggggaggcacggcggggggcgcaggcac
aggggccggaatcaccgcaccccctcccagccgtccctgaccagatacactgatgctgac
acgggtctgggcacagacctcagcaccacaacgcagtcaggcgacttgccacccaaggag
cgcgagcgggaccgcggcaggaccaaggaccgtcgtcaccaccatcaccaccaccatcac
cacagctccatggacaaggagcgctacggacccgaccgccacgactacccacacaggcat
ccacacgaccaccactggtcccgttcgcccagcgaggggccggaggggcggggtcacaga
cagggcagtagttcggtgagcggcagcccggtcccctccacctcggggaccagcactccg
aggagaggccgtcgtcagctgccccagacacccgctgtcccccgtccgcatgtcacctac
tcccccgccgtccgcaagcccagttatggccctccggggccgggccgcctgcgctcacct
tcgccccgacacttctccccaccagaccacgaaagaggctaccaccaccgacctccgtca
cgccacggctccccccaccacgggggctcttcgtccaggcacggttcgccgcgctcccct
agacaccagtccccgcgctcgcccctccacggctcgcccaggtcccctcaccgaggccgc
tggagtgggcctccgcctggggacagcctggaaggcgacgggcctttctacgagcgtgac
tacgagtacgagcggcaccacgagccccctgcctatgagcaaagcctctcccatggcaac
ccgcacccacatggggggaatcctcacccacacccacgctcacctaggactgcccgtcac
gggccccctccgccccctcacccgcatcctcgcagggtgcccaatggctaccgctcatct
tcaccttccccacatcgaaggggaccaccgggggcgcccccccacccacaccaccggccc
cctcatgcccgagggccccgcaagggcctacatgaaccttatagtgagacggacgaggat
gactggtgctag
DBGET
integrated database retrieval system
