Scomber japonicus (chub mackerel): 128380150
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Entry
128380150 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128380150
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128380150
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
DUF4637
Gp58
AAA_23
Motif
Other DBs
NCBI-GeneID:
128380150
NCBI-ProteinID:
XP_053195831
LinkDB
All DBs
Position
19:29587469..29589231
Genome browser
AA seq
558 aa
AA seq
DB search
MAQKGDQLDRESFSCSICLDLLKDPVTIPCGHSYCMSCIKGFWDGEDQRKIYSCPQCRQT
FTPRPVLVKSTMLAALVEQLKKTGLQATPADHCYAGPEDVACDVCTGRKMKAFKSCLVCL
ITYCEKHLQLHYESAFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQSICYLCSVDEH
KGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVENSEK
IFTQLICLLQERSSDVKQQIRSQQETEVSGVKELQEKMQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSEPTDSPSINIRPLRYFEDVTAAVSELRDKLQDILRDKWTNISQAV
TEVDVLLSEPETEPKTRAEFLKYSCEITLDPNTAHTLLLLSEGNRKVERMSQPQSYSSHP
DRFTGWAQVLSRESLTGRCYWEVVWRGKGVRVAVAYKNISRAGQSIESLFGSNDKSWALY
CYTNGYNFWFNNIKTLVSGPLSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLY
AGLCLHNVGATAELCKLK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggagatcagctggaccgagaatccttctcttgttcgatctgtctggat
ctattgaaggatccggtgactattccctgtggacacagctactgcatgagctgtattaaa
ggattctgggatggagaggatcagagaaagatctacagctgccctcagtgcagacagacc
ttcacaccaaggcctgtactggtgaaaagcaccatgttagcagctttagtggagcagctg
aagaagactggactccaagctactcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaagatgaaagccttcaagtcctgtctggtgtgttta
atcacttattgtgagaaacaccttcagcttcattatgaatctgcatttaaaaaacacaaa
ctggtcgagccttcaaagaagctccaggagaacatctgctctcgtcatgatgaggtgatg
aagatgttctgccgcactgatcagcagagtatctgttatctttgctctgtggatgaacat
aaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtcgctctgctgataaagcagtggagaacagtgagaag
atcttcactcagctgatctgtctcctccaggaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagatgcagcaa
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
cccagcatcaatatccgtcctctcagatactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacatcctgagggacaaatggacaaacatctcacaggcagtg
actgaagtggacgttttactgtcagaaccagaaacagagcccaagaccagagctgagttc
ttaaaatattcatgtgaaatcactctggatccaaacacagcacacacactactgttatta
tctgaggggaacagaaaagtagaacgaatgagtcaaccacagtcttattctagtcaccca
gacagattcactggatgggctcaggtgctgagtagagagagtctgactggacgttgttac
tgggaggtggtgtggagagggaaaggagttcgtgtagcagtcgcatacaagaatatcagc
agagcaggacagtcaattgaatctctttttggaagtaatgacaaatcttgggctttatat
tgttacactaacggttataatttttggttcaacaacattaaaactctcgtctcaggtcct
ctttcctccagagtcggagtgtacctggatcacagagcaggtattctgtccttctacagc
gtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctat
gctggactttgtcttcacaatgttggagccacagctgagttgtgtaaactcaaatag
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integrated database retrieval system
