Scomber japonicus (chub mackerel): 128380394
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Entry
128380394 CDS
T09718
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128380394 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128380394 (trim32)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128380394 (trim32)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128380394 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
zf-RING_4
Haem_bd
GIY_YIG_2
DUF2203
Motif
Other DBs
NCBI-GeneID:
128380394
NCBI-ProteinID:
XP_053196174
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All DBs
Position
19:18414172..18417515
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AA seq
684 aa
AA seq
DB search
METPSYPLDPDLMREVLECPICLETYSQDLLRPKLLQCGHTVCRQCLEKLLANTINGVRC
PFCSKVSRMSSISQLADNLTVLKILDCTTSCSAAAAALMCKSCCSRLPRQYCHDCSIVLC
EPCKGEGHLHQGHSVHPIRVAAEQRRKELGGKLTALRKVMGEIQKKKTAIENISKSLRLK
YRAVQQDYTTAELRLQEELSRYRRTFTASMTEVEKLNGQVLEEQTYLLNIAEVKVVSRCD
YLTMRVRQSDVALLKDDGGSSDDEELDLKSSLPTMFQLQEPELVRTEHSKPVEVGQLTTN
TYTVNTDDEESGLEIALEGDVDSVDGAVGATGGAVGAPMDLYRDIDMVAAVEEAVYGSPG
NFKSKSVDAGGGSPGGAGASAGPPVCQFVKKMGCKGTLPGMFNLPVSICVTAQGEVLVAD
RGNYRIQIFNRKGFQHEIRRNASSIDNFVLSFLGADLPNLIPLSIAVTPQGLIGVTDNYD
NSVKVYTMDGHCVACHKNQLIKPWGITAMPSGQFVVSDVEGGKLWCLAVDRNVGVVSYNR
LCSAVRPKFVTCDTAGTVYFTQGLALNFEKRHNEPHLEGGFSIGSVGTDGQLGKQLSHFF
AETEDFRCITGMCVDANGDLLVTDSGRKEILQFPKEGGFKILIQEGLTCPVGVATTQKGQ
LLVLDCWDHCVKVYSYIQRRHSST
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaccttcttacccactggacccggatttaatgagagaagttctcgaatgccct
atatgcctggagacctacagccaggatctattgagacccaaactcctgcagtgtggtcac
acagtgtgccggcaatgtctagagaagctgctggccaataccatcaatggtgtgcgctgt
ccattctgcagcaaggtctcccgtatgagcagtatctcccagctggctgataatctcact
gtgcttaagatcctagattgtactacatcatgtagtgctgctgctgctgccctaatgtgt
aagtcttgctgcagtcgcctaccacgacagtactgccatgactgttccatagttctctgt
gagccctgtaaaggggagggccaccttcatcaaggccattcagtccacccaattagggtg
gctgctgaacaacgtcgtaaagaactgggtggcaagctgactgctctgcgtaaagttatg
ggtgaaattcagaagaaaaagacagccatcgaaaacatttccaagtccttgaggctaaaa
taccgggcagtgcaacaggactatactacagctgaactacgtcttcaagaggaactcagc
aggtatcgaaggacgttcacagcttccatgacagaagtggaaaagctcaatgggcaggtc
ctggaggagcagacatatctccttaacattgcagaggtaaaagtggtgtcacgctgtgat
tatctaacaatgcgggtaaggcagagtgatgttgccttgctaaaggatgatggtggcagc
agtgatgatgaagagctggacctaaagagcagcttgcccaccatgtttcagctgcaagag
ccagagctggtcagaacagagcattctaaacctgttgaagttggccagttgaccacaaac
acttatactgtcaatacagacgatgaagagagtgggttggagattgcacttgagggtgat
gtagatagtgtagatggggcagtaggcgctacaggtggtgcagtgggagctccgatggat
ctttaccgagatattgatatggttgctgctgtagaggaggcggtatatggttcacctggc
aactttaagtcaaagtctgtggatgcagggggtggatcacctggaggagctggggcgagt
gcagggcccccagtctgccagtttgtgaaaaaaatgggctgtaagggaaccctacctggc
atgttcaacttaccagttagcatttgtgtaacagcacaaggtgaggtcttggtggctgac
cgtggcaactaccgcatccagatctttaatcgcaaaggcttccaacatgaaatccgccgc
aatgccagtagcattgacaattttgtcctgagcttccttggggctgacctgcccaacctc
atccccttatccattgctgtcactcctcaaggtctgattggggtcactgacaactatgat
aactcggttaaagtctacactatggatgggcactgcgtggcttgccacaagaaccaactg
attaaaccatggggcatcactgccatgccatcaggccagtttgtggtgtcagatgtggaa
ggaggcaagctttggtgtctagcagtggaccgcaatgtaggtgtggtcagctacaatcga
ctgtgctctgctgtgcggccaaagtttgtgacatgtgacacagctggaacagtctatttc
acccaaggcctggccctgaattttgagaaacgccacaatgagccccacctggaaggtggt
ttctccatcggctcagtgggcactgatggccagctgggcaagcagctcagccatttcttc
gcagagacagaggacttccgctgtatcactggcatgtgtgtggatgccaatggggatttg
ctggtaacagacagcgggagaaaagaaatcctccagtttcccaaagagggtggattcaaa
attctcatccaggaagggctgacctgccctgtaggagtggccaccacccagaaagggcag
ctgctagttctggactgttgggaccactgtgtgaaagtctactcatacattcagaggaga
cattcctccacctaa
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