Scomber japonicus (chub mackerel): 128380701
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Entry
128380701 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128380701
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128380701
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
Prok-RING_4
zf-RING_6
UvrD-helicase
MRP-S31
Gp58
LMBR1
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
128380701
NCBI-ProteinID:
XP_053196545
LinkDB
All DBs
Position
19:complement(27743747..27745423)
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AA seq
557 aa
AA seq
DB search
MAQKGDQLDQETISCSVCLDLLKDPVTIPCGHSYCMSCIKNSWDGEDQRKIYSCPQCRRT
FTPRPVLMKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKASKSCLQCL
ISYCENHLQPHYTVGQFKKHKLVEPSKKLQENICSRHDKVIEIFCRTDQQIICSLCSVDE
HKGHHTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVKAMSRSADKAVEDSE
KIFTELIRLLQKRSSDVKQQIRSQQETEVSGVKELQKKLQQEITELKRKDAELKQLSHTE
DHIQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILRDKWTDISLT
GTEVDVLLSEPEPETRADFLKYSCEITLDPNTAYKYLLLSKGNRKVELMRQQQSYSSHPY
RFTGWWQVLSRESLTGRCYWEVKWRGTGVYVAVAYKNINRAGWANECKFGYNDKSWALDC
RTYSYNFLFNNIKTPVSGPRSSRLGVYLDHRAGILSFYSVSKTMTLLHRVQTTFTQPLHA
GFNIYNYGVTAELCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagatcaactggaccaagaaacaatcagctgttccgtctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgagctgtattaaa
aactcctgggatggagaggatcagaggaagatctacagctgccctcagtgcagacggacc
ttcacaccgaggcctgtcctgatgaaaaacaccatgttagcagctttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaagctgaaagcctccaagtcctgtctgcagtgtctg
atctcttactgtgagaatcacctccagcctcattacactgttggtcaatttaaaaaacac
aagctggtcgagccctcaaagaagctccaggagaacatctgctctcgtcatgataaggtg
atagagatattctgccgcactgatcaacagattatctgttctctctgctctgtggatgaa
cataaaggccaccatacagtctcagctgcagcagaaaggactgagaggcagagagagctc
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaagtgaaggccatgagtcgctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtggagtcaaagagcttcagaagaagctgcag
caggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacggag
gatcacatccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagac
tcatccagcatcaatatccgtcctctcagatactttgaggatgtgacagcagctgtttca
gagctcagagataaactacaggacatcctgagggacaaatggacagacatctcactgaca
gggactgaagtggatgttttactgtcagaaccagagcccgagaccagagctgacttctta
aaatattcatgtgaaatcactctggatccaaacacagcatacaaatatctgttattatct
aaggggaacagaaaagtagaattaatgagacaacaacagtcttattctagtcacccatac
agattcactggatggtggcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtgaagtggagagggacaggagtttatgtagcagtcgcatacaagaacatcaacaga
gcaggatgggcaaatgaatgtaaatttggatataatgacaaatcttgggctttagattgt
cgcacttacagttataattttttgttcaacaacattaaaactcccgtctcaggtcctcgt
tcctccagactaggagtgtacctggatcacagagcaggtattctgtccttctacagtgtc
tctaaaaccatgactctcctccacagagtccagaccacattcactcagcctctccatgct
ggatttaatatttataattatggagtcacagctgagttatgtaaactcaagtag
DBGET
integrated database retrieval system
