Scomber japonicus (chub mackerel): 128381062
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Entry
128381062 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128381062
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128381062
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
UvrD-helicase
zf-RING_10
zf-RING_6
zf-RING_11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128381062
NCBI-ProteinID:
XP_053196987
LinkDB
All DBs
Position
20:complement(1799785..1801449)
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AA seq
554 aa
AA seq
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MAQRDQLDRETFSCSICLDLLKDPVGLPCGHSYCMSCIKGFWDEEDQRKIYSCPQCREAF
TPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAFKSCLQCLV
SYCENHLQSHFESTKLQKHKLVEPSEKLQENICSRHDEVMKIFCRTDKKCICYLCTMEDH
KGHDTVPAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVRDSEK
IFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSELRDKLQDILRDKWTNISAAV
TEVDVLLPQPEPKTRAEFLRYSREITLDPNTANTWLLLSEGNRKVESRYQHQSYSSHTDR
FTDWCEVLSRESLTGRCYWEVERSGGGALFVAVAYKNISRAGSESQFGCNDKSWSLCCDT
NSYEFWFNNINTPVSGPDSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAGL
WVCYESTVELCKVK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagagatcagctggaccgagaaaccttctcttgttcaatctgtctggatcta
ctgaaggatccggtgggtcttccctgtggacacagctactgtatgagctgtattaaagga
ttctgggatgaagaggatcagaggaagatctacagctgccctcagtgcagagaggccttc
acaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctaaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgcactgggaggaagctgaaagccttcaagtcctgtctgcagtgtctggtc
tcttactgtgagaatcatctccagtctcactttgagtcaaccaaactacagaaacacaag
ctggtggagccctcggagaagctccaggagaacatctgctctcgtcatgatgaggtgatg
aagatattctgccgtacagataagaagtgtatctgttatctgtgcactatggaggatcat
aaaggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctcgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcagtcgctctgctgataaagcagtgagggacagtgagaag
atcttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctcagatactttgaggatgtgacagcagctgtgtcagag
ctcagagataaactacaggacatcctgagggacaaatggacaaacatctcagcggcagta
actgaagtggacgttttactgccacaaccagaacccaagaccagagctgagttcttaaga
tattcacgtgaaatcactctggatccaaacacagcaaacacatggctgttattatctgag
gggaacagaaaagtagaaagtaggtatcaacatcagtcttattctagtcacacagacaga
ttcactgactggtgtgaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagcggagtggaggaggagcactttttgtagcagtcgcatacaagaatatcagcaga
gcaggaagtgaatctcaatttggatgtaatgacaaatcctggtctttatgttgtgacact
aacagttatgaattttggttcaacaacattaatactcccgtctcaggtcctgattcctcc
agagtcggagtctacctggatcacagagcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcagcctctctatgctggactt
tgggtttgttatgaatccacagttgagttgtgtaaagtgaaatag
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