Scomber japonicus (chub mackerel): 128381271
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Entry
128381271 CDS
T09718
Symbol
rbfox3a
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128381271 (rbfox3a)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128381271 (rbfox3a)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
128381271
NCBI-ProteinID:
XP_053197209
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All DBs
Position
20:27473232..27732335
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AA seq
380 aa
AA seq
DB search
MSKVSRLHMLCSMANSGCVLLSGSGMLPHSLQCPPAFLYLPQGNQEAPAHPEAMAQPFPP
AQYPPPQNGIPAEYATPHTHPPADYTGPSTVAEHALTLYTQTHTQSEQPGNDSNTPALTA
STVTQAEEVAQTEGSQQLHLQPSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILD
VEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNKKVTNPY
ANGWKLNPVVGAVYGPEFYAVTGFPYPSTGATVTYRGAHLRGRGRAVYNTFRAAPPPPAI
PAYGAVVYQDGFYGAEIYGGYAAYRYAQPAATAAAAYSDSYGRVYATADPYHHTIGPAAT
YSVGTMASLYRGGCSRFTPY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggtgtcccgtctccacatgctgtgctctatggcaaactctggctgtgtgcta
ctgtccgggtccgggatgttaccccattctctacaatgcccccctgctttcctctatctg
ccccagggtaaccaagaggccccagctcaccccgaagccatggcccaacccttcccaccg
gctcagtaccccccaccacagaatgggatccctgctgagtatgccacgccccacacccac
ccaccggctgactacacaggaccaagcacagtggcagagcatgctctgacactctacacg
cagacacacacacagagtgaacagccgggaaatgacagcaacacccccgctctcacagcc
agcacagtaacacaggcagaggaggtcgcacagacagagggttcccagcagctccacctg
cagcccagtgattcatcggagaagcagcagccaaaaaggttacatgtctccaacatacct
ttccgtttccgagaccctgaccttcggcaaatgtttgggcaatttggcaagattttagat
gtggagattatttttaacgagcgaggctccaagggctttgggtttgtaacatttgaaaca
agtgcagatgccgaccgtgcacgggagaaactaaatggtacaatcgtagaaggacgcaaa
atagaggtcaacaatgccacagccagagtaatgaccaataaaaaggtgacgaacccttac
gcaaacggctggaagctgaatccagttgttggagcagtatatggtcctgagttttatgca
gtgacagggtttccataccccagtacaggagcaacagtgacctatagaggggcccatttg
agagggaggggtcgtgccgtctataacacattccgcgctgcacctcctccaccagccatt
cctgcctatggagctgtggtctaccaggatggcttttatggtgcagaaatatatggagga
tatgcagcatacagatatgcccagccagctgctactgctgcagctgcgtacagtgacagt
tatggcagagtctatgcaacagcagacccatatcaccatacgattggtcctgcagctaca
tacagtgtgggtactatggctagcctttacagaggagggtgcagtcgcttcactccctac
tag
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