Scomber japonicus (chub mackerel): 128382749
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Entry
128382749 CDS
T09718
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128382749
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128382749
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_10
zf-RING_5
zf-RING_2
U-box
Prok-RING_4
Phasin_2
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
128382749
NCBI-ProteinID:
XP_053198737
LinkDB
All DBs
Position
21:complement(315448..334706)
Genome browser
AA seq
436 aa
AA seq
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MAQHEVQLDRGKFSCVVCQELLKDPVTTSCGHSYCMSCIQKHWDEEDQMKVYSCPQCKQT
FTPRPVLMKNTMLADLVEQLKKTGQKPTLADYCYAGPEDVACDVCTGRKLKATKSCLTCL
ISYCELHLQPHSESPAFQKHKLVDPLKKLQENICSHHDEVMKIFCRTDQQSICSLCSVDE
HQGHDTVPAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVSRSADKAVEDSE
KIFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHTE
DHNQFLHNYPSVSQLSEPTDSSSINIRPLRDFEDVTAAVSELRDKLQDTLSEDRTKISPT
GTEVDKHFLFCQNSRRRNSCRSLEDLTLVLGLVLGLVLGLVLGLVLDLVLGLVLVLGLVL
GLVLGHNSLTAKGSSC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcacgaagttcagctggacagagggaagttcagctgtgtggtctgtcaggag
ctactgaaggatccagtgactacttcctgtggacacagctactgcatgagctgtatccag
aaacactgggatgaagaggatcagatgaaggtctacagctgtcctcagtgcaaacagacc
ttcacaccaaggcctgtcctgatgaaaaacaccatgttagcagatttagtggagcagctg
aagaagactggacaaaaacctacactggctgattactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactggaaggaagctgaaagccaccaagtcctgtctgacgtgtctg
atctcttactgtgagctccacctccagcctcactctgaatccccagcttttcaaaaacac
aagctggtggatcctttgaagaagctccaggagaacatctgctctcatcatgatgaggtg
atgaagatattctgccgtactgatcagcagagtatctgttctctgtgctctgtggatgaa
catcaaggccacgacacagtcccagctgcagcagaaaggactgagaggcagagagagctc
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggccgtcagtcgctctgctgataaagcagtggaggacagtgag
aagatcttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctgcag
caggagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagac
tcatccagcatcaatatccgtcctctgagagactttgaggatgtgacagcagctgtgtca
gagctcagagataaactacaggacactcttagtgaggaccgcaccaagatctcaccaaca
gggactgaagtggacaaacacttcctgttctgtcaaaacagcagaagaagaaacagctgc
cgctccctggaggacctcacactggtcctgggtctggtcctgggtctggtcctgggtctg
gtcctcggtctggtcctggatctggtcctgggtctggtcctggtcctgggtctggtcctg
ggtctggtcctgggtcataactcactcactgctaaaggctccagttgttaa
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