Scomber japonicus (chub mackerel): 128382837
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Entry
128382837 CDS
T09718
Symbol
pou6f2
Name
(RefSeq) POU domain, class 6, transcription factor 2
KO
K09368
POU domain transcription factor, class 6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128382837 (pou6f2)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128382837 (pou6f2)
BRITE hierarchy
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
FtsX_ECD
FAM176
DUF755
Motif
Other DBs
NCBI-GeneID:
128382837
NCBI-ProteinID:
XP_053198810
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All DBs
Position
21:4958124..5041116
Genome browser
AA seq
678 aa
AA seq
DB search
MITGQLSKPLLSLRSDMSAAELRADDKAATPDSDMNDEPLLLPSDATDREGTPSKLYGAR
DGSVQSDVSSSPSEQSQLGQTHPGYPMGPQCYSVTSLLVAQQLANAVGGVMSGAAPGMNQ
PILIPFNAGGHLGGQQGLVLSLPTANLQSLVAAATAGGIMTLPLQNLQATSSLNSQLQHL
QQLQQMQQHHQQQQQQQQQQQHQHQQQQQQHHHQQTHSHSHSQNQLSSQHHMTPPSQQQS
SVPSPGSACSSASGQPQHSPPHRTNQSPARSLPSPVTPPMPLSLNPLASQAAVAAAAAMG
SIAAGSQVFGNALSNLQGATGQLVTNAQGQIIGTIPLMPNSAGPSSQSGGGNPALQVQPI
TPQLLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLPQAQQGQTGPASSQPNLLH
MPHRQSPLHQASSSSSTSSSSSALSVGQLVSNPQTAPSEVDGVNLEEIREFAKAFKIRRL
SLGLTQTQVGQALSAAEGPAYSQSAICRHTILRSHFFLPQEAQENTIGSSLTGKLNPGLL
YPARFEKLDITPKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTP
QALEILNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPDIGP
AAAMDPLTDSLEELPEMK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggcagctgagcaagccgctgctctccctgcgcagcgacatgagcgcggca
gaactccgagcggacgacaaagcggccacaccggacagcgatatgaacgacgagcccctg
ctcctgccctccgacgccacggacagggagggcactcccagcaagctgtacggagctcgt
gacggttcggtccaatctgacgtcagcagcagtccttctgagcagagtcagctgggacag
actcatcccggatacccaatgggtccacagtgttactcagtgacatctctcctggtggcc
cagcagctggccaacgctgtaggtggcgtgatgtcaggggcggcgccgggtatgaaccag
cccatcctcatcccctttaacgcaggcggacatctgggtgggcagcagggcctggtcctc
tccctgcccacggccaacctccagagcctggtggctgctgctactgcagggggcatcatg
acgctccccctccagaacctgcaagctacctcatcactgaactcccagctccaacacctg
cagcagctccaacagatgcagcagcaccaccagcagcaacagcagcagcagcagcagcag
caacaccaacatcagcagcaacagcagcaacaccatcaccaacagacccactcccactcc
cacagccagaaccagctgtcgtcccagcatcacatgaccccgcccagccagcagcagtcg
tccgtcccgtccccgggctccgcgtgctcctcggcctccggacagccgcagcattccccg
ccacaccggaccaaccagtcgccggcacgcagcctcccttcgcccgtcactccgcccatg
cctttgtcgctgaatcctctggccagccaggcggcggtagcagcagcagcagccatggga
tccatcgccgccggttctcaggtgttcggaaacgccctctcgaacctgcaaggagccacc
ggacagctggtcaccaacgcacaaggacagataattggaacaatcccactgatgcccaac
tctgcagggccctccagccaatcagggggtggcaacccagcactgcaggtacagccaatt
acacctcagcttctgaccaacgctcaaggccagatcatcgccacggtgatcggcaatcag
atcctgcctgtcatcaacacccagggaatcacgctgtcaccaatcaagcctggacagcag
ctgcctcaggcccagcagggtcagacaggccccgcatcgtctcagcccaacctgctccac
atgccccacagacagagtcctctccaccaggcctcctcctcctcctccacctcctcctct
tcctcggctctcagcgtggggcagctggtcagcaacccgcagaccgcccccagcgaggtg
gacggggtcaacctggaggagattcgcgaattcgccaaagcattcaagatccgccgcctg
tccctgggcctgacacagactcaggtgggccaagctctgagcgcggccgagggtccggct
tacagccagtcagccatctgcagacacaccatcctgagaagccactttttcctaccacag
gaagcccaagagaacactataggtagcagtctgacaggcaaactgaaccctggcctttta
tatcctgccaggtttgagaagttggacatcacccctaaaagcgcccagaagattaagccc
gttctggagcgctggatggccgaggctgaggcccgccaccgatccggcatgcagaacctg
actgagtttatcggcagcgagccttcgaaaaaacgcaagcggaggacctctttcaccccg
caggcgctcgagatcctcaacagccactttgagaagaacacgcacccttccggacaggaa
atgacggaaatagcggagaaactgaactatgacagggaggtggtgcgagtctggttctgc
aacaagaggcaagctttgaaaaacacgataaagcgtttgaaacagccagacatcggaccg
gccgcggccatggaccctctcaccgattctctagaggagctccccgaaatgaaatga
DBGET
integrated database retrieval system
