Scomber japonicus (chub mackerel): 128383635
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Entry
128383635 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128383635
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128383635
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
Fib_alpha
UvrD-helicase
FapA
Phenyl_P_gamma
WDCP
Motif
Other DBs
NCBI-GeneID:
128383635
NCBI-ProteinID:
XP_053199203
LinkDB
All DBs
Position
22:complement(26664960..26666576)
Genome browser
AA seq
539 aa
AA seq
DB search
MAQRDQLNRESFSCSICLDLLKDPVGLPCGHSYCMSCIKGFWDGEDQRKIYSCPQCREAF
TPRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDICTGRKLKAFKSCLVCLA
SYCENHLQPHYDAAPLKKHKLVEPSKKLQENICSCHDKVMEIFCRTDKKSICYLCTMEDH
KGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVEAVTRSADKAVEDSEK
TFTQLIRLLQKRSSDVKQQIRSQQETEVSGVKELQEKLQQEITELKRKDAELKQLSHTED
HNQFLHNYPSVSQLSEPTDSSSINIRPLRYFEDVTAAVSDLRDKLQDILRDKQTNISLTV
TEEKVSLSEPEPEPKTRAEFLKYSREITLDPNTVNTYLLLSDGNRKVEYTRQQQSYSSHT
DRFSDRWQVLSRESLTGRCYWEVEWRGNVDVAVAYKNISRRGSESLFGHNDKSWSLWCYP
NNYEFWFNNIKTPVSGPGSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYTG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagagatcagctgaaccgagaatccttctcctgttcgatctgtctggatcta
ctgaaggatccggtgggtcttccctgtggacacagctactgtatgagctgtattaaagga
ttctgggatggagaggatcagaggaagatctacagctgccctcagtgcagagaggccttc
acaccgaggcctgtcctgaagaaaaacaccatgttagcagctttagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatatctgcactgggaggaagctgaaagccttcaagtcctgtctggtgtgtctggcc
tcttactgtgagaatcacctccagcctcattatgatgcagctccattaaagaaacacaag
ctggtggagccctccaagaagctccaggagaacatctgctcttgtcatgataaggtaatg
gagatattctgccgtacagataagaagagtatctgttatctgtgcactatggaggatcat
aaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagcttgag
gtgagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctgctt
caacaggaggtggaggccgtcactcgctctgctgataaagcagtggaggacagtgagaag
accttcactcagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtggagtcaaagagcttcaggagaagctgcagcag
gagatcactgagctgaagaggaaagacgctgaactgaagcagctctcacacacagaggat
cacaaccagtttctacacaactacccctcagtgtcacaactcagtgaacctacagactca
tccagcatcaatatccgtcctctcagatactttgaggatgtgacagcagctgtgtcagat
ctcagagataaactacaggacatcctgagggacaaacagacaaacatctcactgacagtg
actgaagagaaagtttcactgtcagaaccagaaccagaacccaagaccagagctgagttc
ttaaaatattcacgtgaaatcactctggatccaaacacagtaaacacatatctgttatta
tctgatgggaacagaaaagtagaatatacgagacaacaacagtcttattctagtcacaca
gacagattcagtgataggtggcaggtcctgagtagagagagtctgactggacgttgttac
tgggaggtggagtggagaggaaatgttgatgtagcagtcgcatacaagaatatcagcaga
agaggaagtgaatctctatttggacataatgacaaatcttggtctttatggtgttaccct
aacaattatgaattttggttcaacaacattaaaactcccgtctcaggtcctggttcctcc
agagtcggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcagcctctctacactgga
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integrated database retrieval system
