Scomber japonicus (chub mackerel): 128384077
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Entry
128384077 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128384077
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128384077
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
RSS_P20
Exonuc_VII_L
Perilipin
Gp58
Golgin_A5
LMBR1
zf-RING_6
BshC
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
128384077
NCBI-ProteinID:
XP_053199631
LinkDB
All DBs
Position
22:complement(23919817..23925255)
Genome browser
AA seq
543 aa
AA seq
DB search
MAQQGNQADRVKFCCSICLDLLKDPVTIPCGHNYCMNCIKTFWDGEDQKIHSCPQCRKTF
IPRPELVKNTMLAELVEELKKTELGAAPEDHCYAGPEDVACDVCTGRKLKALKSCLVCLA
SYCEQHLQPHYDSPAFQKHNLADASAKLQDTICSLHNEVMKIFCRTDQQCICILCSMDEH
KGHDTISAAAERTEKQKELRVSRQNIQQRIQDREKDVKELQQEMEAINQSADKAVEDSEK
IFTELIRRIQKRSSDVKQQIRSKQETEVNHVKELQKKLEKEITELKRKDTELEKLSCTED
HIQFLKKYPSLSGVSGSAGAPRTNIDRLWYFKDVMAAVTAARDKMQVILSEKWPQADPKK
RAEFLKCSGQITLDPNTANNCLVLSDRNRKITHNDKNIRYPHHPDRFIHAYQVLSKDGLT
GRCYWEVERSGSVGVAVAYNSIGRSGNLNAHAFGYNDKSWVLHCGNSYVFRHNKIGVAIS
GPQSSRIGVYLDHSAGVLSFYSISDTTTLLHRVQTTFTQPLYAGLYLSSNGDTAEFCELK
QTE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggaaatcaagcagacagagttaaattctgttgttccatctgtctggat
ctactgaaggatccagtgactattccctgtggacacaattactgtatgaattgtattaaa
actttctgggatggagaagatcagaaaatccacagctgtcctcagtgcagaaagactttc
ataccgaggcctgaactggtgaaaaacaccatgttagcagagttagtggaggagctgaag
aagaccgaactgggagctgctcctgaagatcactgctatgccggacctgaagatgtggcc
tgtgatgtctgcactggtaggaagctgaaagccctcaaatcctgtctggtgtgtctggcc
tcttactgtgagcaacaccttcagcctcactatgattctcctgcttttcaaaaacacaac
ctggccgacgcttctgctaaacttcaggacaccatctgctctcttcacaatgaagtgatg
aagattttctgccgcactgatcaacagtgtatctgtattctttgctccatggatgaacat
aaaggccacgacacaatctcagctgcagcagaaaggactgagaagcagaaggagctcaga
gtgagtcggcaaaatatccaacagagaatccaggacagagagaaagatgtgaaggagctt
caacaggagatggaggccatcaatcaatcagctgataaagcagtggaggacagtgagaag
atcttcactgagctgatccgtcgcattcagaaaagaagctcagatgtgaagcagcagatc
agatccaagcaggaaactgaagtgaatcacgtcaaagagcttcagaagaagctggaaaag
gagatcaccgagctgaagaggaaagacactgaactggagaagctctcatgcacagaggat
cacatccagtttctaaagaaatacccctcgctgtcaggtgttagtggatctgcaggtgct
cccagaaccaacatagatcgcttgtggtactttaaggatgtgatggcagctgttacagca
gccagagataaaatgcaggtcattcttagtgagaaatggccacaagcagatccgaagaaa
agagcagagttcttaaagtgttcaggtcagatcacactggatccaaacacagcaaacaat
tgtctggttttatcagacaggaacagaaagataacacataatgataaaaacatacgatat
cctcaccatccagacagattcattcatgcatatcaggtcctgagtaaagatggactgact
ggacgttgttattgggaggtggagcggagcgggagtgttggagtagcagtcgcatacaac
agtattggtaggtcaggaaaccttaatgcacatgcatttggatataatgataagtcttgg
gtattacattgtggaaacagttacgtattcagacataacaagatcggagtagccatctca
ggccctcagtcctcaagaataggagtctacctggatcacagtgcaggtgttctgtccttc
tacagcatctctgatacaacgactctcctccacagagtccagaccacattcactcagcct
ctctatgctggactttatctttcgtctaatggggacactgctgagttttgtgagttgaag
cagacagagtag
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