Scomber japonicus (chub mackerel): 128384079
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Entry
128384079 CDS
T09718
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128384079
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128384079
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
SPRY
zf-C3HC4_2
zf-RING_2
PRY
U-box
Prok-RING_4
zf-RING_5
DUF2057
LMBR1
FapA
Perilipin
Motif
Other DBs
NCBI-GeneID:
128384079
NCBI-ProteinID:
XP_053199633
LinkDB
All DBs
Position
22:complement(23927110..23928917)
Genome browser
AA seq
535 aa
AA seq
DB search
MAQQGNQADRVKFCCSICLDLLKDPVTIPCGHNYCMNCIKTFWDGEEQKIHSCPQCRKTF
KPRPELGKNTMLAELVEELKKTGLGAAPDDHCYAGPEDVACDFCAGTKLKALKSCLVCLA
SYCEQHLQPHYDSPAFKKHNLVDASAKLQETVCSLHNEVMKIFCRTDQQCICILCSMDEH
KGHDTISAAAERTEKQKELSISQQNIHQRIQDRQKDMKELQQEVETINQSADKAVEDSEK
IFTELIRLIQKRSSDVKQQIRSQQETEVNHVKDIQEKLEKEITELKKKDTELEKLSCTED
HTQFLKKYPSMSDVCGSADSPRSNINRLWYFKDVMADVTAARDKMQVILSEKWQQADPKT
RAEFLQCSCQITLDKNTAHTLLMLLDRNRKITYNIFKQTVRVSEILSAYQVLSKDGLTGR
CYWEVERSGTVDVAVAYKDNGRKLTDAFGYNDKSWALRCDTGYTFTHNKISVAISGPQSS
RIGVYLDHSAGVLSFYSISDTMTLLHRVQTTFTQPLYAGLRLFSDDDTAEFSELK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggaaatcaagcagacagagtgaaattctgttgttccatctgtctggat
ttactgaaggatccagtgactattccctgtggacacaactactgcatgaactgtattaaa
actttctgggatggagaagagcagaaaatccacagctgtcctcagtgcagaaagactttc
aaaccgaggcctgaactaggtaaaaacaccatgttagcagagttagtggaggagctgaag
aagaccggactgggagctgctcctgatgatcactgctatgccggacctgaagatgtggcc
tgtgatttctgcgctgggacgaagctgaaagccctcaaatcctgtctggtgtgtctggcc
tcttactgtgagcaacaccttcagcctcactatgattctcctgcttttaaaaaacacaac
ctggtcgacgcttctgctaaacttcaggagaccgtctgctctcttcacaatgaagtgatg
aagattttctgccgcactgatcaacagtgtatctgtattctctgctccatggatgaacat
aaaggccacgacacaatctccgctgcagcagaaaggactgagaagcagaaggagctcagc
ataagtcagcaaaatattcaccaaagaattcaggacagacagaaagatatgaaggagctt
caacaggaggtggagaccatcaatcaatcagctgataaagcagtggaggacagtgagaag
atcttcactgagttgatccgtctcattcagaaaagaagctcagatgtgaagcagcagatc
agatcccagcaggaaactgaagtgaatcacgtcaaggatattcaggagaagctggaaaag
gagatcactgagctgaagaagaaagacactgaactggagaagctctcatgcacagaggat
cacacccagtttcttaagaaatacccctcgatgtcagatgtttgtggatctgcagactct
cccagaagcaacatcaatcgcttgtggtactttaaggatgtgatggcagatgttacagca
gccagagataaaatgcaggtcattcttagtgagaaatggcaacaagcagatccgaagacc
agagcagagttcttacagtgttcatgtcagatcacactggataaaaacacagcacacact
cttctgatgttattagacaggaacagaaagataacatataatatatttaaacaaactgtt
cgagtttcagaaatattgagtgcatatcaggttctgagtaaagatggactgactggacgt
tgttactgggaggtggagaggagcgggactgttgacgtagcagtcgcatacaaggataat
ggcagaaaacttacagatgcatttggatacaatgataagtcttgggctttacgatgtgac
actggatacacattcacacataacaagatctcagtagccatctcaggccctcagtcctca
agaataggagtctacctggatcacagtgcaggtgttctgtccttctacagcatctctgat
acgatgactctcctccacagagtccagaccacattcactcagcctctctatgctggactc
aggcttttctctgatgatgacactgctgagtttagtgagttgaagtag
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integrated database retrieval system
