Sphingobium indicum UT26S: SJA_C1-07020
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Entry
SJA_C1-07020 CDS
T01201
Name
(GenBank) large repetitive protein
KO
K20276
large repetitive protein
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SJA_C1-07020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
Big_3_3
Cadherin_5
HemolysinCabind
Big_3_2
Big_9
Motif
Other DBs
NCBI-ProteinID:
BAI95536
NITE:
SJA_C1-07020
UniProt:
D4YYV4
LinkDB
All DBs
Position
1:complement(706510..713289)
Genome browser
AA seq
2259 aa
AA seq
DB search
MDKHVEIQQRGSKLPEKTAVTDRNAVVSVQPQSVIKVVAPPNSVSSMLREGDDLIIHFAD
GSTIRLDGYFACPTEDISQLFVADPASAGEWLVSFTDAACGLATDATSQALSYAYTPMAS
GIGAAAAAGGGISDGLLAGLGALVLGGGIAAAAGGGGSNRGPAGPVDQTPPAAPAISPSN
GRSLSGTAEAGATVRIDLDANGSIDASVTADANGNWTYTPPNPIANGTRISVTAVDSAGN
VSTPSQITVDAAAPAAPTIDPTDGTMLNGSAEAGSTVNIDLNGDGAPDASVVAGTDGRWA
YTPAAPLVDGTTVTVTATDAVGNVSPPTSLTLDLSAPAAPVLVTLTDDVGAIIGGIASGG
ATDDRQPTLGGTAEAGAKLSIYDGNVLLGETTADANGAWSFTPAAPLAEGAHIISVTATD
AAGNISAASPPFAFAVDTIAPAAPVLGPTDGTTISGTAEIGATIELDTDGDGIADATTTA
DANGEWRIILPTSLANGTQVSATATDAAGNRSGPGSAIVDTGLDTTPPAIPILGSVTDDV
DPAQGPLSNGGATNDVRPLLAGGGVEAGATISIYDGGTVIGTTTADGAGNWTFTPTDALG
EGAHSLTVTATDAFGNESDASPAFVLTVDTVAPDTPTIRPSNGAGLSGMAEPGATINLDL
NGDGTVDVTVTADGTGEWQYVPDARLPDGATVIVTASDPAGNLSPPASRVVDADVPVAPV
ITGIVDDVAPIIGGLANGASSNDVQPTFSGTAEAGSTVYLYDNGAQIGTAAADGSGNWTF
TPAALTDGAHSFSVTATDEAGNISGPSSPFVITVDTAAPAAPAMNPTDGNTISGTAEAGA
TIAIDINGDGAADATTTANSAGEWSVGLGTPLGNGTLVSATASDSAGNSSGPSTVTVTTA
IDSTPPPIPTFDSATDDVAPVLSALSSGATSNDTQPLLAGSGVEAGATVSIYDNGVLLGN
GTVDGSGNWTFTPGAPLSEGAHSLTVTATDGSGNESAASAPFLLTIDTAAPGAPTISPSN
GDVLTGTAEAGATINIDLDGNGSADTSVTADPSGNWTFDPIGVVPDGTTVIVTASDAAGN
VSGPASTVIDAIAPAAPAITALTDDQGGSTGGISPGAATDDDRPAIAGTADIGATVLLFD
NGTQIGTAAVDGSGNWAFTPAIALPDGPHSFSARAVDAAGNVSSLSASFAITIDTLSPNA
GAITGISDNVPGAIGPIPNGSLTNDAQPTLSGTADPGESVTIMDNGVAIGTAPVDGLGAW
SFTPLAPLSDGAHSFTIVTVDAAGNGSSASTAYAVTIDSAAPAAPVIDAAADNSGSITGT
VAAGGSTDEVQPTLSGTVEPGSTVAIFSNGTPAGNASVDPAGNWTFTPALPLGDGTYNFT
AVATDPAGNSSGLSSPFTITIDTAAPSLPIITQASDDVGGAPTPIAPGGLTDDALPVLSG
TTEALATVTIFDNGTAIGTTTADGSGNWTFTPGSPLALGAHSITASAIDAVGNESLQGAP
FNFTLIAVAGGIPVIGGVSDDVGAVNGPVLNGGVTDDATPTLSGTGPASTTLAIFDNGTQ
IGTASTDGSGAWSFTPTTALTDGTHDLTAAEALGGGAFGPASGAFTINVDTAAPAAPAIT
VAIDDVAAFTGGITDGGLTNDSAPEIRGTGEIGATVTLFDNGSPVGTAVVDASGNWSISP
VGPLAEGLHSFTASAADEAGNAGPLSAAFTLTVDLTPPPAPTITAVTDDVAQQTGTVTNG
GISNDVLPQISGTAIAGSTVQIFDNGALLGTTVADGGGNWSFTPGGALANGSHGFTVAQL
DSAGNASSPSPVYSVTIDTVAPTAGIAITTLTQDTGVVGDWSTQDSAPTIAGTLTAPLSA
GERVEIQIDGGAWVSATASGTSWFYGPGTLAVGQHGVNVRVIDSAGNIGDVEAQQFTITN
VNQAPIVQASGTSLLGLVGAEALGLIDLSTQSLTAYDPNNNLRSVEVRFAPLLSANLGAF
TLTASTALAAELGLQVSIANNPGLLGILAPSSVLTVTALDGGPISNQAINELLNTVHFNQ
DLTLLGLNVLDTTTITATDMNGLTASSATGTLANLSLLNASGSSAVLEGNASANTINGTA
ANERLYGHGGADTLNGNGGNDLLRGGAGADTLNGGTGNDVLVHDAADASIDGGTGVDTLL
IDSGTGMVLNLDAVNNIRNIERIDLGVGDAGRQITLTEAGIIRATEASHQLIVTGDLNDS
VTMTGATLQGQTLINGQAFDHYALGTTNIYVEDPVMVVV
NT seq
6780 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcatgtcgagatccagcaacgcggatcgaagcttccagagaagacggctgta
actgaccggaacgcggtcgtctccgtccaaccccaatccgtcataaaggtcgtcgctccg
cccaatagcgtttcctccatgctgcgcgaaggcgatgacctcatcatccacttcgccgac
ggatctaccatccgactggatggctatttcgcctgtcccactgaagacatcagccagctg
ttcgtcgcagacccagccagtgcgggcgaatggctggtaagcttcaccgatgccgcctgc
ggtcttgccaccgatgccacgagccaggcgctgagctacgcctacacgcccatggccagc
ggtattggcgcagcagcggcagcaggcggcgggatcagcgacgggctgctcgctggtctc
ggcgcgcttgttttggggggtggcatcgccgcagcagcgggcggcgggggtagcaacaga
gggcctgccgggcctgtcgatcagacgcctcccgccgccccggcaatatcccccagcaat
gggcgctccctctccggcacggcggaagcgggggcaaccgttcgcatcgatctggatgca
aatggttccatcgacgccagcgtgaccgccgacgccaacggcaactggacctatacgccg
cccaatcccatcgccaacggcacccgcatatccgttacggccgtggacagcgctggaaat
gtctccacacccagtcagatcacggtggacgcagcggctccggccgcgccgacgatcgac
cccacggacggaaccatgctgaacggttcggccgaagccggttcgaccgtgaatatcgat
ctcaatggcgatggcgcgcccgatgcatccgttgtcgcgggaaccgacggacgctgggcc
tacaccccggccgcgccgctggtggacggcaccaccgtcacggtcaccgccacggatgcc
gtcggcaatgtctcgccgcccacgtccctgaccctggatctgagcgccccggccgcgccg
gtccttgtcacgctgacggacgatgtcggagcgatcatcggcggtatcgccagcggcggc
gctaccgacgacaggcagccgacccttggcggcaccgccgaggctggagcgaagctttcc
atctatgacggcaacgtgctgctgggcgagacgacggctgacgccaatggcgcctggagc
ttcacgccggccgccccactggccgagggtgcccacatcatcagcgtgaccgcgactgat
gcagcgggtaatatcagcgccgcttcgcccccctttgcctttgcggtcgatacgatcgcc
cctgcagcccctgtcctgggaccaaccgacggaacgacgatttccggcactgccgaaatc
ggtgcgacgatagagctggacaccgatggggacggcattgccgatgcgacgacgacagcc
gacgccaatggtgagtggcgcatcattctgccgacatcgctggcgaacggcacccaggtc
agcgcaacggcgacggatgcggcaggaaaccggtccggtcccggctcggccatcgtggat
accggcctcgacacgactcctccggccataccgatcctgggcagcgtcacggacgatgtc
gatccggcacagggtccgctcagcaacggcggcgcgaccaacgacgttcggccactgttg
gcgggcggcggcgtcgaagcaggcgcgaccatttccatttatgacggcggcacggtgatc
ggcacgacaacggccgatggcgccggtaactggaccttcactccgaccgacgccctgggt
gagggcgcgcacagcctgaccgtgacggcaaccgacgccttcggcaatgagagcgacgcc
tctccagcctttgtgctgacggtcgataccgtcgcgccagacacgcctacgatccgcccg
agcaatggcgctggattgagcggcatggcggagccgggggcaacgatcaatctggatctg
aacggcgacggcacggtcgatgtcacggtcacagccgatggaacgggtgagtggcaatat
gtccccgacgcccggctgcccgacggtgctacggtcatcgtcacggcaagcgaccccgcg
ggcaacctttccccgccagcatcgcgcgtggtggacgctgacgtgccggtggcgcccgtc
atcaccggcatcgtcgacgatgtcgcgccgatcatcggcgggctggccaatggcgcaagc
tcgaatgacgtccagccgaccttcagcggcacggcggaagcaggatcgacggtctatctt
tacgacaatggcgcgcagatcggcacggcggcggccgatggcagcggcaactggaccttc
acgcccgctgccctgaccgatggcgcgcacagcttttccgtcacggcaacggatgaagca
ggcaatatctcgggtccgtcatcccccttcgtgatcacggtggacaccgctgcccctgcc
gcgcccgccatgaaccctacggacggcaacaccatatccggcacggccgaggcgggggcc
acgatcgccatcgacatcaatggcgatggagcggccgacgcgaccacgaccgccaacagt
gcgggcgaatggtcggtcggccttggcacgccactggggaacggcactctcgtcagcgcg
acggcaagcgacagcgcgggcaacagttctggaccttcaacagtaaccgtcacgaccgcg
atcgacagcacgccgccgcccattcccaccttcgacagcgcaacggacgatgtcgcccct
gtcctgtccgcgctgtccagcggcgcgaccagcaacgacacccagcctttgctggcgggg
agcggcgtggaagcgggcgcaaccgtttccatctacgataatggcgtgctgctgggcaac
ggcaccgtcgatgggtcgggcaactggacattcacgccgggcgcgccgctgagcgagggc
gcgcacagcctgacagtgaccgcgacggacgggtcgggcaatgaaagcgcggcatcggcc
cccttcctgctgacgatcgataccgctgcccccggcgcacccacgatcagccccagcaac
ggggatgtgctgaccggcacggccgaagccggcgcgacgatcaacatcgatctggacggc
aacgggtcggcggacaccagcgtcaccgccgatccatccggcaactggaccttcgatccg
atcggcgtggttccagacgggacgaccgtgatcgtcacggccagcgatgcggcgggcaat
gtctccggcccggcatcgaccgttatcgacgccatcgcaccggcggcacccgcgatcacg
gccctgaccgatgatcagggtggatcaacgggcgggatctctcccggcgctgcgacggac
gatgatcggcccgccatcgccggaacggccgacatcggcgccacggtcctgctgttcgac
aatggcacgcagattggcacagccgccgtggatggttcggggaactgggcttttacgccc
gccatcgccttgccggacgggccgcatagcttcagcgcccgcgcggttgatgctgcaggc
aatgtcagcagcctgtctgcttccttcgcgatcacgattgatacgctttcgcccaatgcc
ggcgcgatcacgggcatcagcgacaatgtgccgggagcaatcggcccgatcccgaacggc
agcctgaccaatgacgcgcagccgaccctatcaggcacggcggacccaggcgagagcgtc
accatcatggacaatggtgtcgcgatcggcaccgcccccgtcgatggcctgggcgcatgg
agcttcacgccgctcgcgccgctgagcgatggtgcgcacagcttcaccatcgtgacggtg
gatgccgccggaaacggcagcagcgcctcaaccgcttatgcggtgacgatcgacagcgcg
gccccggctgcgcccgtcatcgatgccgcggcagacaatagtggatcgatcaccggcacg
gtcgcggccggaggctcgaccgacgaagtccagccgaccctgtcgggaacggtcgagccg
ggatccaccgtcgccatcttcagcaacggcacgccagcgggcaacgcgtcggtcgatccg
gcgggcaactggaccttcacgccggcactgccgctgggggacggcacctataatttcacc
gctgtcgccaccgatccggcaggcaacagcagtggcctgtcctcaccctttaccatcacc
atcgacacggctgcgcccagcctgccgatcatcacccaggccagcgacgatgtgggcggc
gcgccgacccccattgctcccggcggcctgacggacgacgccttgccggtcctgtcgggc
acgaccgaggcgcttgccacggtcaccatcttcgacaatggcaccgcgatcggcaccacg
acggcggacggttcgggcaactggacctttacccccggctcccccctggcactgggcgcc
catagcatcacggcctcggcaatcgacgcggtcggcaatgaaagccttcagggagcgcca
ttcaacttcacgctgatcgcggtggcgggcggcattcccgtcatcggcggcgtgagcgac
gatgtcggcgccgtaaacggaccggtcctgaacggcggcgtgacggacgatgccacgcct
acgctcagcggaacgggaccggccagcaccacgctcgccatcttcgacaatggcacgcag
atcggcaccgcttccaccgacggatcgggcgcgtggagcttcacgcccaccaccgccctt
accgacggcacccatgatctgaccgcagccgaagcgctgggcggtggcgcgttcgggcct
gcgtcgggcgcgttcaccatcaatgtcgacaccgccgctccggctgctcctgccatcacg
gtggcgatcgacgatgtggcagcgttcaccggcggcatcacggacggcggccttaccaac
gatagcgcgcccgagattcgaggcacaggcgaaataggcgcgacggtgacgctgttcgac
aatggcagtcccgtgggcacggccgtggttgacgccagcggcaactggagcatatctccc
gtcggcccgcttgccgaagggctgcacagcttcaccgcgtcggccgccgacgaggcgggc
aatgccggtcccctttccgccgccttcaccctgacggtcgacctcactccgccgcccgcg
ccgacgatcaccgctgtcacggacgatgtcgcccaacagaccggcacggtcacaaatggc
ggcatcagcaatgacgtgttgccgcaaatcagcgggacggcgatagccggatcgaccgtc
cagatcttcgacaatggcgcgttgctgggtacgaccgttgctgacggcggcggcaactgg
agcttcacgcccggcggggcgctggcgaacggatcgcatggcttcaccgttgcccagctt
gacagcgccggcaatgccagcagcccatcgccagtctattccgtcaccatcgatacggtc
gcgccgaccgccggcatcgccatcaccacccttacccaggatacgggcgtggtcggcgat
tggtcgacgcaggatagtgcccccacgatagcgggcaccctgaccgcgcccctcagcgct
ggtgaacgggtggaaatccagatcgatggaggtgcctgggtttccgcgacggccagcggg
acgagctggttctacggccccggtacgcttgccgtcggccagcatggcgtcaacgtccgc
gtcatcgattccgccgggaatatcggcgatgtggaagcgcaacagttcacgatcaccaac
gtcaatcaggcgccgatcgtgcaggccagcggcacttccctgctggggctggtgggggca
gaagcgctgggcctgatcgatctcagcacccagtccctcaccgcctacgatcccaacaat
aatctgcgcagcgtcgaggtgcgtttcgcacccttgctgtcggccaatctgggcgctttc
acattgacggcttccaccgctctggcggctgaactgggcctgcaggtttccattgccaac
aatcccgggctgctgggcatcttggcgccctcctccgtcctgaccgtcacggcgctcgac
ggtgggccgatcagcaatcaggccatcaatgaactgctgaacacggttcatttcaatcag
gatctgacgctgctcggccttaacgtgctggatacgacgacgatcaccgcgaccgacatg
aatgggctgacggccagttcggccacaggcacgcttgccaatctgagcctgctgaacgcc
agcggttcaagcgccgtgctggaaggcaatgccagcgccaacacgatcaatggcacggcc
gcgaacgaaaggctttatggccatggcggcgcagatacgctgaacggcaacggcggtaat
gaccttctgcgcggcggagccggtgccgacacccttaatggcgggacgggtaatgatgtg
ctcgtccatgacgcggccgatgcatcgatcgatggcggaaccggcgtcgacacgctgctg
atcgacagcgggacggggatggtgctgaacctcgacgccgtaaacaacattcgcaatatc
gagcggatcgacttgggtgtcggcgatgcagggcgacagattacgctgacggaagccggc
atcatccgcgccacggaggcaagccatcaactgatcgtcacaggcgatctcaacgacagc
gtcaccatgactggcgcaaccttgcaggggcagacgctgatcaacgggcaggccttcgat
cattacgccttgggcaccaccaacatctatgtggaggaccctgtaatggtcgttgtctga
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