Sphingobium indicum UT26S: SJA_C1-25720
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Entry
SJA_C1-25720 CDS
T01201
Name
(GenBank) RND-family efflux transporter
KO
K18138
multidrug efflux pump
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp01501
beta-Lactam resistance
sjp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SJA_C1-25720
01503 Cationic antimicrobial peptide (CAMP) resistance
SJA_C1-25720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C1-25720
01504 Antimicrobial resistance genes [BR:
sjp01504
]
SJA_C1-25720
Transporters [BR:
sjp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SJA_C1-25720
Antimicrobial resistance genes [BR:
sjp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SJA_C1-25720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
BAI97406
NITE:
SJA_C1-25720
UniProt:
D4Z474
LinkDB
All DBs
Position
1:complement(2587165..2590269)
Genome browser
AA seq
1034 aa
AA seq
DB search
MQLSDLSVRRPVFAAVVAVLLCIVGVVGYLSLSIREYPDTDPPIVSVETSYTGAAASVVE
TRITQIIEDGVAGVQGIQNINSTSRDGVSSVNIEFDPSRDIDSAANDVRDRVSGIVEDLP
EDALAPEIRKVDADARAILFIVFTRDGWTPTQIADYLDRNVLDRFSAIDGVARVTGGGDE
RPSTRIWLNAEKLTAFGITPGDIESALRAQNVELPAGRFESKDQNQTLRVERAFSTPEQF
AQLVVGRGADGYQVKLGDVARIEQGAENPYTSFRSNAATGVGVGIIRQSGANTLEVAEKA
KALIAELRTTLPPGMKVTIGSDESLFIGRAIDNVYDTLGEAALLVVLVIFLFLGSMRATI
IPSITVPICLLATCAVMWLLGLSINLLTLLAFVLAIGLVVDDAIVVLENVYHRIEQGEDP
LVASYLGTRQVGFAIISTTLVVCAVFVPVMFLAGQTGLLFRELAIAMIAAIAFSGFISLS
LAPMLCSKLLRHSERSRLSRWVDDRFQRLEAAYGRLLDRVLRRPLMAVVPVLLFLGIAGA
LFTMLPTELAPAEDTGVVDGQVTAPEGTGFDRMKIYMEKIETDLQPLRDKGILQVLNMRA
PAGFGASDDFNGGNIIAFLRPWEDRTVTTAQVADTINKIIASQPGVRGNVAPRSGLGRGR
GLPVNLVLAGSTYEGLVAARDRIMAAAATNPGFINLDSDYKETKPQMRIEVDQQRAGDLG
VSANDISQALQTLLGSRRVTTYVDRGEEYRVLVQAEREGRQTQADLERINVRSRTGMLVP
LSAVVTLREVAGPRQLNRFNKLRAITLTAALAPGYSLGEALNFLEDQARQSPEVLALGYR
GESQSLRETGGSIWLVFGLTILIVYLLLAAQFESFVHPGVIIATVPLAVAGGVLGLALTG
GSVNLYSQIGIVMLVGLAAKNGILIVEFANQLRDEGLEIGAAIRQAAARRLRPILMTSIA
TVIGALPLVIRGGAGAAARHSIGVVVVSGVSLATLITLFLIPILYSRVAGRTVSPQTVSR
RLDSALKDSPEAAE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcagctttcggacctgtccgttcgccgtccggtcttcgcggcggtcgtcgcggtgctg
ctctgcatcgtcggggtggtcggctatctcagcctgtccatccgcgaatatcccgacacc
gacccgcccatcgtctcggtcgagaccagctataccggcgcggcggcctcggtcgtcgaa
acccgcatcacgcagatcatcgaggatggcgtcgcgggcgtccagggcatccagaacatc
aattcgacctcgcgggacggcgtttcctcggtcaatatcgaattcgacccgtcgcgggac
atcgattccgccgccaacgacgtgcgcgaccgcgtcagcggcatcgtggaggatttgccg
gaggacgcgctggcccccgaaatccggaaggtcgacgccgatgcgcgggcgatcctgttc
atcgtcttcaccagggacggctggacccccacccagatcgccgattatctcgaccgcaac
gtgctggaccgcttttcggccattgacggcgtcgcccgcgtcaccggcggcggcgacgag
cggccctccacccgcatctggctgaatgcggagaagctgaccgccttcggcatcacgccg
ggcgacatcgaaagcgccctgcgcgcccagaatgtggaactgcccgccgggcgtttcgag
tccaaggaccagaaccagacgctgcgcgtcgagcgcgccttctccacgcccgaacagttc
gcgcagcttgtcgtcgggcgcggcgcggacggctatcaggtgaagctgggcgacgtggcg
cggatcgagcagggcgcggaaaatccctacacctccttccgctccaacgccgcgaccggc
gtgggcgtcggcattatccgccagtcgggcgcgaacactctggaagtcgcggaaaaggcg
aaggcgctgatcgccgaactgcggaccaccctgccgccgggcatgaaggtcaccatcgga
tcggacgaatcgctgttcatcggccgcgccatcgacaatgtctacgacacgctgggcgaa
gcggccctgctggtggtgctggtcatcttcctcttcctggggtcgatgcgggctacgatc
atcccgtcgatcaccgtgccgatctgcctgctggcgacctgcgccgtcatgtggctgctg
ggcctgtcgatcaacctgctgacattgctggccttcgtgctggcgatcgggctggtggtg
gacgacgccatcgtcgtgctggaaaatgtctatcaccgcatcgaacagggggaagacccg
ctggtcgcctcctatctcggcacgcggcaggtgggcttcgcgatcatttcgaccacgctg
gtcgtctgcgcggtgttcgtgccggtgatgttcctggccgggcagaccggcctgctgttc
cgcgaactcgccatcgcgatgatcgccgccatcgccttttccggcttcatttccttgagc
ctcgcgccgatgctctgttcgaagctgctacgccattccgaacgctcgcgcctgtcgcgc
tgggtggacgacaggttccagcggctggaggcggcctatggacgcctgctcgaccgcgtg
ctcaggcggccgctcatggctgtcgtccccgtgctgctgttccttggaatcgccggcgcg
ctgttcaccatgctgccaaccgaactcgccccggcggaggataccggcgtggtcgacggc
caggtgacggcccccgaaggcaccggcttcgaccgcatgaaaatctatatggagaagatc
gaaaccgatcttcagccgttgcgcgacaagggcattcttcaggtgctgaacatgcgcgcg
cctgccggtttcggggcgagcgacgatttcaacggcggcaacatcatcgccttcctgcgg
ccgtgggaggaccggaccgtcaccaccgcgcaggtggccgacacgatcaacaagatcatc
gccagccagcccggcgtgcgcggcaatgtcgcgccgcgttcggggcttgggcggggacgc
ggcctgccggtcaatctggtgctggccgggtcgacctatgaggggctggtggcagcccgc
gaccgcatcatggccgccgccgcgaccaatccgggcttcatcaacctcgattccgattac
aaggaaaccaagccgcagatgcggatcgaggtggaccagcagcgggcgggcgatctgggc
gtatcggccaacgacatcagccaggccttgcagacgttgctcggttcccgccgcgtcacc
acctatgtcgaccggggcgaggaatatcgcgtgctggtgcaggcggagcgggaggggcgg
cagacccaggccgacctggagcgcatcaacgtgcgcagccgcaccggcatgctggtgccc
ctgtccgccgtcgtcacccttcgcgaagtcgcggggccgcgccagctcaaccgtttcaac
aagctgcgcgccatcaccctgaccgctgccctggcgccgggctattcgctgggcgaggcg
ctgaacttcctggaggatcaggcccgccagtcgcccgaagtgctggcgctgggctatcgg
ggcgagagccagtcgctgcgcgagaccggcgggtcgatctggctggtcttcggcctcacc
atattgatcgtctacctgctgctggccgcccagttcgaaagcttcgtccaccccggcgtc
atcatcgccaccgtccccctggcggtcgcgggcggcgtgctgggcctggcgctgacgggc
gggtcggtcaatctctacagccagatcggcatcgtcatgctggtggggctggcggcgaag
aacggcatcctgatcgtcgaattcgcgaaccagctccgcgacgaggggctggagatcggc
gcggccatccgtcaggcggccgcccgtcgcctgcgcccgatcctgatgacctccatcgcc
acggtcatcggcgccctgccgctggtcatacgcggcggcgcgggcgcggcggcgcgtcat
tccatcggcgtggtggtggtgtccggcgtcagcctggcgacgctgatcacgctgttcctg
atcccgatcctctattcgcgggttgcgggacgaaccgtttcaccgcaaaccgtcagtcgg
cggctggactcggccttgaaggattcgcccgaagccgccgagtaa
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