Sphingobium indicum UT26S: SJA_C1-27320
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Entry
SJA_C1-27320 CDS
T01201
Name
(GenBank) putative helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sjp03029
]
SJA_C1-27320
Enzymes [BR:
sjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SJA_C1-27320
Mitochondrial biogenesis [BR:
sjp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SJA_C1-27320
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAI97566
NITE:
SJA_C1-27320
UniProt:
D4Z4N4
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All DBs
Position
1:2738117..2740753
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AA seq
878 aa
AA seq
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MPDIAGTMALFARSPVTAVLGPTNTGKTHLAVERMCGHSSGMMGFPLRLLAREVYDRVVG
MKGPAQVALITGEEKIVPPGARYFLCTAESMPIGGGREPAQEGLKDYAFVALDEAQLGAD
PERGHIFTDRLLRARGREETMILGSASIGRLVKALVPDAEIIGRPRFSTLSYAGAKKLSR
LPKRSAIVAFSAEEVYAVAEMLRRFRGGAAVVMGALSPRTRNAQVQMFLNGEVDYLVATD
AIGMGLNLDVAHVAFASLRKFDGRRTRRLTVSEMAQIAGRAGRHHRDGTFGSLGHEDGDA
AFTPEEIEAIEAHRFPPVEQLFWRDGTPRTDRLDHLLSDLEQKPERPELRPAPEAVDLAV
LKRLADDPVVIERARGKKQVERLWAACGLPDFQKLGAEHHARAVSRIWRFLSEGSGHIPR
DWFAQQIARLDSVQGDIDTLSGRIAAARTWSYIAHRADWLAHPAEMAERTRALEEKLSDA
LHAALTQRFVDRRTTVLLRDMGQSAANLPVEMEPDGTVCVDGETIGRLDGFRFSVDPATR
HQDRKMLLAAAERRLGRILRVKADELLGAPDTDFALTDEAGQAPGISWQGNPVASLHGGS
ALLAPEIRLDRALLALGQDVQKQVATRLAAWFDAQKGKHLLPLTKMVASSADPEVPAVVR
AVFAQLADAGGVIARTDLDSALGHLDKDQRHLLRRAGIDIGVLDIYHPGLLKPGSARWRA
ALLAARLGKPCLPLPGPGLTLIPAGEKFDQMGARIAGFRGFGDQMLRIDMAERMARTAHE
AIAKNEAFTAQSPQIVSLGLSEEAFLQLMRLAGFRPVEAPEEGGPNWVFRGRQKPRPHQQ
QRGDKRGDRPPRPAASSGPAPTGNHAFAGLAELLGRNG
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacatagcgggaaccatggccctattcgcccgctcgcccgtcaccgccgtcctg
gggcccaccaacaccggcaagacccatctggcggtcgaacgcatgtgcggccacagttcc
ggcatgatgggctttccgctgcgcctgctggcgcgggaggtctatgaccgggtggtcggc
atgaagggcccggcgcaggttgccctcatcaccggcgaggaaaagatcgtgccccccggc
gcccgctatttcctctgcacggcggaatccatgcccatcggcgggggccgcgaacccgcg
caggagggcctgaaggattacgccttcgtggccctcgacgaagcccaactcggcgcggac
ccggaacgcggccatatcttcaccgaccgcctgctgcgggcgaggggccgcgaggaaacg
atgatcctcggctcggccagcatcggccgcctggtcaaggcgctggtccccgatgcggag
atcatcggccgcccccgcttctccactctcagctatgcgggcgcgaagaaactctcccgc
ctgcccaagcggtccgccatcgtcgccttctccgccgaagaggtttacgcggtagccgaa
atgctccgccgcttccggggcggcgctgcggtggtgatgggcgcgctgtccccccgcacc
cgcaacgcgcaggtgcagatgttcctgaatggggaggtcgactatctggtcgccaccgac
gccatcggcatggggctgaacctggacgtcgcccatgtcgccttcgcctccctgcgcaag
ttcgacggccgccgcacccgccgcctcaccgtcagcgaaatggcccagatcgcgggccgg
gcaggccgccaccaccgggacggcaccttcggcagcctcggccatgaagatggcgacgcc
gccttcacccccgaagagatagaagccatcgaggcccatcgcttcccgccggtcgaacag
cttttctggcgcgacggcacgccgcgcaccgaccggctcgaccatctgctctccgacctt
gaacagaagcccgaacgccccgaactgcgccccgcccccgaagcggtggacctggccgtc
ctcaagcggctggccgacgaccccgtcgtcatcgaacgcgccagggggaagaaacaggtc
gaacgcctctgggccgcctgcggcctgcccgatttccagaagctgggcgcggaacatcat
gcccgcgccgtcagccgcatctggcgcttcctttcggaggggagcggccacatcccccgc
gactggttcgcgcagcagatcgcccgactcgattcggtgcagggcgacatcgacacgctt
tcgggccgcatcgcggcggcgcgcacatggtcctacatcgcccatcgcgccgactggctc
gcccatccggcggaaatggccgaacgcacccgcgccctggaagaaaagctgtccgacgcc
ctccacgccgcgctgacgcagcgtttcgtggaccggcgcaccaccgttctgctaagggac
atgggccagagcgcggccaacctgccggtcgaaatggagccggacgggacagtctgcgtc
gatggcgagacgatcgggcgacttgacggatttcgtttctcggtcgatcccgctacccgg
catcaggacaggaagatgctgctggcggccgctgaacggcgccttggaaggatattgcga
gtgaaggctgacgaattactgggcgcgcccgatactgatttcgcgctcacggacgaagcg
ggtcaggcccccggcataagctggcagggcaatccggtggcgagcctgcacggcggctcc
gcgctgctggcccccgaaatccggctggaccgcgccctcctcgccctgggccaggacgtg
cagaagcaggtcgcgacccgcctcgccgcatggttcgacgcgcagaagggaaagcatctc
cttcccctcaccaagatggtcgcgagcagcgccgaccccgaagtccccgccgtcgtccgc
gccgtcttcgcgcagcttgccgatgcgggcggcgttatcgcgcgcaccgacctcgattcg
gctctcggccatctcgacaaggaccagcggcacctgctgcgccgcgcaggcatcgatatc
ggcgtgctcgacatctaccatcccggcctgctgaagcccggctccgcccgctggcgcgcc
gccctgctggccgcccgcctgggcaagccctgcctgccgctgcccggccccggcctcacc
ctgatcccggcgggcgagaaattcgaccagatgggcgcccgcatcgccggtttccggggt
ttcggcgaccagatgctgcgcatcgacatggccgaacgcatggcccgcaccgcgcatgaa
gccatcgccaagaacgaagccttcaccgcgcaaagcccgcagatcgtctcgctgggcctg
tcggaagaagccttcctgcaactgatgcgcctcgccggtttccgccctgtggaagcgccc
gaagagggcggccccaactgggtcttccgcggccgccagaagccccgaccccaccagcag
cagcgcggcgacaagcgcggcgaccgcccgccccgccccgccgcctcgtccggcccggcg
cccaccggcaaccacgccttcgccggcctggccgaactgctgggccgcaatggctga
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