Sphingobium indicum UT26S: SJA_C1-28350
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Entry
SJA_C1-28350 CDS
T01201
Name
(GenBank) ABC-type transport system periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SJA_C1-28350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C1-28350
Transporters [BR:
sjp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SJA_C1-28350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BAI97669
NITE:
SJA_C1-28350
UniProt:
D4Z4Y7
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All DBs
Position
1:2835178..2836716
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AA seq
512 aa
AA seq
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MRVKPCPDMISAPSRPFPAWLTLGGAALMAAMSGSCSNEGSGPVTVSVIGSPADFAKPLE
NLPDPGSKLFLEATAQGLVAFDAGGEILPALAQRWIVEDDGRSYIFRLRRAFWPDGRKVL
AKDVGRLLMARIEALRRLDPAGPLDAVQDVVAMTGEVIEIRLAAPRPYVLQMLAQPQMAI
LSREGGTGPYRRENRGGIPDKALVLTPVERATNESGDELPVPAWQTRIVRAERAALAITR
FQQGKAALVLGGRFADLPLLVPAGVDRDDVRIDPVQGLLGLAVTGRSGASGKLLEDDGVR
RAINMAIDRSRLPVMFPVGGWATTEQIVPGQIDLPGPPAAPDWSGLPQEERWAQGQAVMK
RWRSEHGDPPVLRVALPKGPGSTLLFGLVRHDLGMIGLAVERVDMTADADLRLVDEVAAY
DSALWYLGRIGCARKVHCSAEAEAQLQAASLAASLDERMARVAQAEALMQAHNGFIALGA
PVRWSLVARRLTGFMASPRARHPLNHLFRSTN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggttaagccttgtccggacatgatttccgccccttcccgtccctttccagcctgg
ctgacccttggcggagccgccctgatggcggcgatgtcgggaagttgctcgaatgagggg
agcggcccggtcacggtcagcgtgatcggcagccccgccgatttcgccaagccgctcgaa
aatctgcccgatcccggatcgaagctgtttctggaagccaccgcgcaggggctggtggcg
ttcgacgccgggggggagatattgcccgccctggcccagcgctggatcgtcgaggacgat
ggccgcagctacatcttccgcctgcgccgggcgttctggccggacggccgcaaggtgctg
gcaaaggatgtcgggcggctgctgatggcgcggatagaggcgctgcgccggctggacccc
gccgggccgctggacgcggtgcaggacgtggtggcgatgacgggcgaggtgatcgagatc
aggctggcggcgccgcgcccctatgtgttgcagatgctggcccagccgcagatggcgatc
ctgtcgcgggaaggcgggaccggcccctatcggcgggagaaccggggcggcattccggac
aaggcgctggtgctgacgccggtggagcgggccacgaacgaatccggcgacgaactgccg
gtgcccgcctggcagacccggatcgtccgggcggagcgggcggcgctcgccatcacccgt
ttccagcagggcaaggccgcgctcgtgctgggcgggcgctttgccgacctgccgctgctg
gtgcccgccggggtggaccgcgacgatgtgcggatcgatccggtgcaggggctgctgggg
ctggcggtgacgggccggagcggggcgagcggcaagctgctggaggatgacggcgtgcgg
cgggccatcaacatggcgatcgaccgcagccgcctgccggtgatgttccccgtcggcggc
tgggccacgaccgagcagatcgtgccggggcagatcgacctgcccggaccgcccgccgcg
ccggattggtccggcctgccgcaggaggaacgctgggcgcagggacaggcggtcatgaag
cgctggcgcagcgagcatggcgacccgccggttttgcgcgtggccctgcccaaggggccg
ggctccaccctgctgttcgggctggtgcggcatgacctgggcatgatcggcctggcggtc
gagcgggtcgacatgacggccgacgccgatctgcggctggtcgacgaggtcgcggcctat
gacagcgcgctctggtatctggggcggatcggctgcgcgcggaaggtgcattgctcggcg
gaggcggaggcgcaattgcaggcggcgagccttgccgccagcctggacgagcgcatggcc
cgcgtggcgcaggcggaggcgctgatgcaggcgcataacggcttcatcgccctgggcgcg
cccgtgcgctggtctcttgtggcgcggcggctgaccggcttcatggcgtcgcccagggcg
cggcacccattgaaccatctgttcaggagcaccaactag
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