Sanguibacter keddieii: Sked_05620
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Entry
Sked_05620 CDS
T01214
Name
(GenBank) fibronectin type III domain-containing protein
Organism
ske
Sanguibacter keddieii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Big_9
Cadherin_5
Cadherin_4
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
ACZ20522
UniProt:
D1BAH1
LinkDB
All DBs
Position
628275..634433
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AA seq
2052 aa
AA seq
DB search
MRLGRGATRAERARSTSAVVAGVTVPAVLAIMAVIDPGVKIAEVDLNDGAVWVTNRSELK
LGRYDATVKELNGGLVATDPSFDVLQSGQDVLLSEPRMLSTVDPATMALSAQAEVPAGST
VAMGAGVVAITSPEGSVWIRTMTSLASVTSDTPGDLDLGDGALATVDPDGLVLALDPTDG
TVHRGEMVDGTLEITDAGTLDDAAGVLPDAVTAVDGRLVMLAGTTLHGDGWTTEVVDGAA
PVLQQSSSQGPALAVATTSHLLEVDLGSGEVEATPSTGRGTPAAPVRVGECVYGAWASPT
GSYLVRCGDGDPTVLDLERMTAQSTPVFRVNRAVVALNDTLQGNMWLPDEMPRVQVPNWD
QIEQDDDTTDTEEESDEVESTQQQLTECTAQSAAPGAVDDDLAVRPGRSTVLEVLNNDTA
GECGIIAISELDTSGLDEGFAVVEPVFGGRALQAVVSPQAQGSAQLTYTISDGRGNSPPS
TATVTLTAADPGSNSAPLELRTGSVELEQGATVDHDVLAGWVDPDGDELVLLGAVTDGTA
TVRARQNGMLTVTAEGEALGRQTVTVVVSDGIEQTTGQVTVDVRATGSLAPRIDPIHVVT
EAGKDVEVDVLESVHSLSREPVRLASVDEPPGTTVEATLDDGTFTFTATNAATYYVPFSV
VASPQQAQGLVRVDVVEPTTEPQRPVAVRDLAPLPRGGEVIVDPLANDVDPAGGVLVVTS
VAAVDGSALQAVVVDHRYVRISSQRDLAAPETLEYRVSNGLEEVSGEILVQPVEPTGEDR
PPVLQDLEASVRTTGVVTIPVLDSAVDPDGDVMSVVPDLLEDLSPEQGLLFASGDVLRFQ
ATGTPGIVETTYSVQDTGGNVTTARLTISVHASDPETKTAPRPRALTARTFDGETVRIPV
PLTGIDDDGDGVTLLGQGDSVPTLGRIVAVGADYLEYEAFPGSSGTDSFQYAVEDWTGQR
AQATVRVGISARSAQGQAIVARNDEATVRPGQRVEVRVLRNDVDPSGGELTLAPELEVPE
GIEAHVDKRRVVVTAPDQATEPLSIVYTVTNELGATARATLTVYVVDDAPIAPPIARDVT
VAPIEVVDKTSVEVDVLALAENPSGPLSDLEVRVPSSHSDVAQVVAGDRVLVTLTDRTQN
IPYRLVNTRPEADGAGAYAFITVPALGDFPPTLRPKTRELRVASGEELEISLAEFVQVGT
GKTARVRDAERVSATNSDQSDLVVDDTTLRFVSAPGYAGPASITVEVTDGATRDDQGARR
STLTLPITVFTEDARPPTFTPSELLVPQGESTSVDLLGFTRGPQGASAEQKYTYEVVQAP
GNGFLASITPGTTRLAVSVPADVARGTLGSATVRLGYGTEGTMDVQVTFKVAASSRQLAS
LMVHEAEGAAGRDTTINALAGAGNPFSEPLTLLSASPVVAAQGTARVSGSNVVIRPAEGF
TGQMVVRYRVRDVTGDPLREVDGTIRVAVRDVPGAPSPPRVGAVTSRAVPLAWDAPTTNG
SPITGYRVTRSPGGQTTSCPTTTCTVTGLNNGTEYTFTVAAENALGWGPESTASVRATPD
AVPGIPGAPSLEAGDRTVTATWSAPANDGTPVTKYTAELSGPGGIVSREIAGTTIVFSGL
ENGSGYTVRVRAHNAATPPEGGAWSDGSRAAVPAGLPGTPEVSAARVDTVLGGQIRAAWT
AAGSNGAEVTGYSVVAQSPGHPTLTASVGGGDRETLFTSVVNGAEYTVSVTARNSVGEGA
PGVSAPTSTFAPPKAPTGARAAAASGRPFGDGQVTLSWNAPTDTGGVGIRVARYELEGPG
GIESLVETSKTVSPIAGGTQSAQFRVRAINDREAVGEWTTIAPVDVRTVPQKPVVTITPN
GFRSVNASWVVENNGGSSVTGYKVWVNGAESSTAGTSMSIDVPLDGLVTVQVVAVNAQGD
SLPESKQGGPAASQPPTAPAAVTATPMDAPPSITMNWSPASENGSPITGYEYRLTRPNGT
VSRWYQASGGPSATTATATAAEQGVGPGIWRVEVSAVSPKGRTTAPPIEVTIAEPPTPEP
EPTDPGTDPGTG
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgggcgcggcgccacgcgcgccgagcgtgcacggtccacctcggccgtcgtc
gccggcgtgaccgtcccggccgtgctggcgatcatggccgtcatcgacccgggcgtgaag
atcgccgaggtcgacctcaacgacggcgccgtgtgggtcaccaaccgctccgagctcaag
ctcggccgctacgacgcgaccgtcaaggagctcaacggcgggctcgtggcgaccgacccg
tccttcgacgtgctgcagtccggtcaggacgtcctgctctccgagccccggatgctctcg
accgtcgaccccgcgaccatggcgctctccgcgcaggccgaggtgcccgccggctccacg
gtggccatgggtgcgggtgtcgtcgcgatcacctcgcccgagggttccgtgtggatccgc
accatgacgagcctggcctccgtcacgagcgacacccccggcgacctcgacctcggtgac
ggggcgctcgcgaccgtcgaccccgacggcctcgtgctcgccctcgacccgaccgacggc
accgtgcaccggggcgagatggtcgacgggaccctcgagatcaccgacgccgggaccctc
gacgacgccgcgggcgtgctgcccgacgccgtcaccgcggtcgacggccggctcgtcatg
ctcgcggggaccacactgcacggcgacggctggaccaccgaggtggtcgacggtgccgcg
cccgtgctccagcagtcctcgtcgcagggcccggccctcgcggtcgcgaccaccagccac
ctgctcgaggtcgacctcggctccggggaggtcgaggcgaccccctcgaccggtcgcggc
acgcccgcagcgcccgtgcgcgtgggcgagtgcgtctacggtgcctgggccagcccgacc
ggcagctacctcgtgcgctgcggcgacggcgacccgacggtcctcgacctcgagcgcatg
accgcgcagagcacgccggtgttccgcgtcaaccgcgcggtcgtcgccctcaacgacacc
ctgcagggcaacatgtggctgcccgacgagatgccgcgcgtccaggtgcccaactgggac
cagatcgagcaggacgacgacaccacggacaccgaggaggagtccgacgaggtcgagtcc
acccagcagcagctcaccgagtgcaccgcgcagtcggccgcaccgggtgccgtcgacgac
gacctcgccgtccgccccgggcgctcgaccgtcctcgaggtcctcaacaacgacaccgcc
ggcgagtgcggcatcatcgcgatcagcgagctcgacacgagcggcctcgacgagggcttc
gcggtggtcgagcccgtgttcggcgggcgcgcgctccaggccgtcgtgtccccgcaggcc
cagggcagcgcgcagctgacctacacgatctccgacggccgcggcaacagcccgccctcg
acagccaccgtgacgctcaccgccgccgaccccgggagcaactcggcgccgctcgagctg
cgcaccgggtcggtcgagctcgagcagggcgcgaccgtggaccacgacgtcctcgccggg
tgggtcgaccccgacggtgacgagctcgtgctcctcggcgcggtcaccgacgggaccgcg
acggtccgcgcgcgccagaacggcatgctcaccgtcaccgccgagggcgaggccctcggc
cgccagaccgtcaccgtcgtggtgagcgacggcatcgagcagaccaccgggcaggtgacc
gtcgacgtccgcgcgaccggctcgctggcgccccgcatcgacccgatccacgtggtcacc
gaggccggcaaggacgtcgaggtcgacgtcctcgagtcggtccacagcctctcccgcgag
cccgtgcgcctcgcgagcgtcgacgagccgcccggcaccaccgtcgaggccaccctcgac
gacggcaccttcaccttcaccgcgaccaacgccgccacgtactacgtgccgttctccgtg
gtcgcctcgccccagcaggcgcagggcctcgtccgtgtcgacgtcgtcgagccgaccacc
gagccgcagcgcccggtcgccgtgcgcgacctcgcgccgctgccccgcggcggcgaggtg
atcgtcgacccgctcgccaacgacgtcgaccccgccggcggcgtcctcgtggtgacctcc
gtcgccgcggtcgacggctccgcgctgcaggccgtggtggtcgaccaccggtacgtccgc
atcagctcccagcgcgacctcgccgcccccgagaccctcgagtaccgcgtgtcgaacggc
ctcgaggaggtctccggcgagatcctcgtgcagcccgtcgagcccacgggcgaggaccgc
ccgccggtcctccaggacctcgaggcgtcggtgcgcaccacgggcgtcgtgacgatcccc
gtgctcgacagcgccgtcgaccccgacggcgacgtgatgtcggtcgtccccgacctgctc
gaagacctcagccccgagcagggcctgctgttcgcctcgggcgacgtgctgcgcttccag
gcgaccggcaccccgggcatcgtggagacgacgtacagcgtccaggacaccggcgggaac
gtcacgaccgcccggctgaccatctcggtgcacgcctcggaccccgagaccaagaccgcc
ccgcggccccgcgcgctcaccgcgcgcaccttcgacggcgagaccgtccgcatccccgtg
ccgctcaccggcatcgacgacgacggcgacggcgtcaccctcctcggccagggcgacagc
gtgcccaccctcgggcgcatcgtcgccgtgggggccgactacctcgagtacgaggccttc
cccgggtcctccggcaccgactcgttccagtacgccgtcgaggactggacggggcagcgc
gcccaggcgaccgtccgcgtcgggatctccgctcgcagcgcgcagggacaggccatcgtc
gcccgcaacgacgaggcgacggtccggcccggccagcgcgtcgaggtccgcgtgctgcgc
aacgacgtcgacccctcgggcggcgagctcaccctcgcccccgagctcgaggtgcccgag
ggcatcgaggcgcacgtcgacaagcgccgtgtcgtggtcaccgcgcctgaccaggccacc
gagccgctctccatcgtctacaccgtgaccaacgagctcggtgccacggcccgcgcgacc
ctgaccgtctacgtcgtcgacgacgcgcccatcgccccgccgatcgcccgcgacgtcacg
gtggccccgatcgaggtggtcgacaagacgagcgtcgaggtcgacgtgctcgccctcgcc
gagaacccctccgggccgctgagcgacctcgaggtgcgggtgccgtcgtcgcactcggac
gtcgcccaggtggtcgccggcgaccgcgtgctggtcaccctcaccgaccgcacccagaac
atcccctaccgcctggtcaacacccggcccgaggccgacggcgccggcgcgtacgccttc
atcaccgtgcccgccctcggcgacttcccgcccacgctgcgccccaagacgcgcgagctg
cgcgtggcctccggcgaggagctcgagatctccctcgccgagttcgtccaggtcggcacc
ggcaagaccgcgcgcgtccgcgacgccgagcgggtctcggcgacgaactccgaccagagc
gacctcgtggtcgacgacaccaccctccggttcgtctcggcccccggctacgcgggcccc
gcctcgatcacggtcgaggtcaccgacggtgccacccgcgacgaccagggcgcacgccgc
tcgacgctcacgctgcccatcaccgtgttcaccgaggacgcccgcccgccgaccttcacg
ccgagcgagctcctcgtgccgcagggcgagtccacgagcgtcgacctgctcgggttcacc
cgtgggccccagggagcgtcggccgagcagaagtacacctacgaggtggtccaggcgccc
ggcaacgggttcctcgcctcgatcaccccgggcaccacgcgcctcgccgtgagcgtcccc
gccgacgtcgcccgcggcaccctcggcagcgcgaccgtgcgcctcggctacgggaccgag
gggaccatggacgtccaggtcaccttcaaggtcgccgcgagctcgcgccagctcgcctcg
ctcatggtccacgaggccgagggcgccgccggtcgggacaccacgatcaacgcgctggcc
ggggcaggcaaccccttcagcgagccgctcacgctgctcagcgcctcgccggtcgtcgcc
gcgcagggcaccgcgcgcgtctccggcagcaacgtggtgatccggcccgccgagggcttc
accgggcagatggtcgtgcggtaccgggtccgcgacgtcaccggcgacccgctgcgcgag
gtcgacggcaccatccgcgtcgccgtccgcgacgtgcccggcgcaccgtcgcccccccgg
gtcggggccgtgaccagccgcgccgtgccgctcgcctgggacgcgcccaccaccaacggc
tcgcccatcaccggctaccgggtgacccggtcgcccggtggccagacgacgtcctgcccc
accaccacctgcaccgtgaccggcctgaacaacgggacggagtacaccttcaccgtcgcg
gccgagaacgccctcggctggggccccgagtcgaccgcgagcgtccgggccaccccggac
gccgtccccggcatccctggcgccccgagcctcgaggccggcgaccgcacggtcaccgcc
acctggagcgcccccgcgaacgacgggacgcccgtcaccaagtacacggccgagctctcc
ggacccggcggcatcgtgtcccgcgagatcgccgggaccaccatcgtgttctccggcctc
gagaacggctccggctacaccgtccgcgtccgcgcccacaacgccgccaccccgcccgag
ggcggggcctggagcgacgggtcgcgcgccgccgtgcccgccggcctgccagggaccccc
gaggtcagcgcggcacgggtggacacggtgctcggcgggcagatccgcgccgcctggacc
gccgccggctcgaacggcgccgaggtcaccgggtacagcgtggtcgcgcagagcccgggg
cacccgacgctcaccgcgtcggtcggcggcggagaccgcgagacgctgttcacctccgtg
gtcaacggcgcggagtacacggtgtccgtcaccgcccggaactcggtgggcgagggggcg
ccgggcgtcagcgcgccgacctcgaccttcgcgccgcccaaggcgccgaccggggcgcgc
gctgcggctgcctcgggccggcccttcggcgacggccaggtcacgctctcgtggaacgcc
ccgaccgacaccggtggagtgggcatccgcgtcgcgcgctacgagctcgagggccctggc
ggcatagagagcctcgtcgagaccagcaagaccgtctcgccgatcgccggcgggacgcag
tccgcccagttccgggtccgcgcgatcaacgaccgtgaggccgtgggcgagtggacgacg
atcgcgccggtcgacgtgcggaccgtgccgcagaagccggtcgtcacgatcacccccaac
gggttccgcagcgtcaacgcgtcgtgggtcgtcgagaacaacggtgggtcgtcggtgacc
gggtacaaggtctgggtgaacggcgcggagtcctcgacggctgggacctcgatgtcgatc
gacgtgccgctcgacggtctcgtcacggtccaggtcgtcgccgtcaacgcccagggcgac
agcctgccggagagcaagcagggcggccccgcggcatcgcagccgccgaccgccccggcc
gcggtgaccgcgacgccgatggacgcgccaccgtcgatcacgatgaactggagcccggcg
agcgagaacggaagcccgatcactgggtatgagtaccgactgacgcgcccgaacggcacc
gtctcacgctggtaccaggcttccggtggcccctcggccacgaccgcgacggccactgcg
gcggagcagggtgtcggaccggggatctggcgcgtcgaggtgtccgcggtcagcccgaag
ggtcggacgacggccccgccgatcgaggtgacgatcgctgagccacccacgcctgagccc
gagcccaccgacccgggcacggaccccggcacggggtga
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