Shewanella khirikhana: STH12_02003
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Entry
STH12_02003 CDS
T06711
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
skh
Shewanella khirikhana
Pathway
skh00521
Streptomycin biosynthesis
skh00523
Polyketide sugar unit biosynthesis
skh00541
O-Antigen nucleotide sugar biosynthesis
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01250
Biosynthesis of nucleotide sugars
Module
skh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
STH12_02003 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STH12_02003 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STH12_02003 (rmlC)
Enzymes [BR:
skh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
STH12_02003 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZQ11091
UniProt:
A0A3S9L695
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Position
complement(2274025..2274555)
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AA seq
176 aa
AA seq
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MQVIATALNEVKLIVPKVFRDDRGYFFESWQQQKFAELVAPIHFVQDNHSLSVKGTLRGL
HWQEQHPQDKLISVLQGDIFDVAVDIRKDSPTYGKWVGEILSSDNHKQMFIPKGFAHGFY
VLSETAMVSYKCSDFYHPASERCIRWDDPVLAIHWPLSSSPLISEKDNLGMAFVDL
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaatagctactgcactcaatgaggtaaagcttattgtcccaaaggtgtttcgg
gatgatcgcgggtatttttttgaatcctggcaacagcagaaatttgccgagttagtggca
cccattcattttgtgcaggacaaccactcactttcagttaaaggcacactgcgagggctg
cattggcaggagcagcatccgcaggataagttgatatctgttttgcagggtgacatcttt
gatgtcgcggtggatatccgcaaagactcgccgacctatggcaagtgggttggagagata
ctgtccagcgataaccataagcagatgttcatccctaaaggttttgcccacggtttttat
gtgctttcagaaactgccatggtgagttacaaatgcagcgatttttatcatccagcatcc
gagcgttgtatccgctgggatgaccccgtacttgccatacactggccgctctcatcgtcg
ccacttatttccgagaaagataacttgggtatggcttttgtggatttgtaa
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