Shewanella khirikhana: STH12_03178
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Entry
STH12_03178 CDS
T06711
Symbol
hemD
Name
(GenBank) Uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
skh
Shewanella khirikhana
Pathway
skh00860
Porphyrin metabolism
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01120
Microbial metabolism in diverse environments
skh01240
Biosynthesis of cofactors
Module
skh_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
STH12_03178 (hemD)
Enzymes [BR:
skh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
STH12_03178 (hemD)
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Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
AZQ12242
UniProt:
A0A3Q9E7U1
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All DBs
Position
3606706..3607425
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AA seq
239 aa
AA seq
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MKLLLTRPEGKNGAMTAALSARGIPFTVQPLLAVQSLGVTNEQLAALVGVDMLIFISTSA
VSYGAKALNGNWPDAHYYAVGDATAEALLDYGIHAERAPADSQATEGLLTLPSLANVSGK
RIVIVRGRGGREAMAEGLRERGAEVSYLEVYQRACPSLDGSALSQHWQDFGVDTIVVTSG
EVLENLINLVPKDSFAWLSGCHIIVPSARVEDRARELGLVRVTNAGAANQAAVLDALGM
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctgctcacccgtcccgagggtaaaaatggcgccatgacggccgccctcagc
gcccggggtattccctttactgtgcagccattgttggcggtgcagtcattgggggttacg
aatgagcagctcgccgcgcttgtcggcgttgatatgctgatttttatcagcaccagcgcc
gtgagctatggcgccaaagccctcaacggcaattggccagatgcccactattatgctgtg
ggcgatgccaccgccgaggcgctgctcgattacggcattcacgccgagcgcgcgccggcc
gacagtcaggccaccgaaggcttgcttactctgccctccctggccaatgtcagcggcaaa
cgcattgtgatagtccgaggccgcggcggccgcgaagccatggccgaagggctgcgtgag
cgcggcgccgaagtcagctatcttgaggtgtatcagcgcgcctgcccaagcctcgatggc
agcgcacttagccagcattggcaggacttcggagtggacaccatagtggtcaccagtggc
gaagtcttggaaaacctgataaatctcgtacccaaagacagttttgcttggcttagcggc
tgtcatatcatagtgcccagcgcccgggttgaagaccgggcaagggagctgggacttgtc
agagtcaccaacgccggagcagcaaatcaagccgccgtgctggacgcactgggcatgtga
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