Streptococcus koreensis: D7D50_04115
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Entry
D7D50_04115 CDS
T06405
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ski
Streptococcus koreensis
Brite
KEGG Orthology (KO) [BR:
ski00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ski03019
]
D7D50_04115
Messenger RNA biogenesis [BR:
ski03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D7D50_04115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AYF93827
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All DBs
Position
804105..805055
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AA seq
316 aa
AA seq
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MVKINQMKKDELFEGFYLIKSADVRQTRAGKNYLAFVFQDETGTIEGKLWDAQPHNVEQF
QAGRVVHMSGRREVYNNTPQVNQLTLRLPQSGEPSNPADFKEKPPVNPVDLKDYLSGMIF
KIENPVWQRVVRALYNKYDKEFYSYPAAKTNHHAFETGLAYHTATMVRLAESISQVYPQL
NQSLLYAGIMLHDLAKVLELSGPENTEYTVRGNLIGHIALIDEEITKVLQELKIDDQKED
VIVLRHVILSHHGLLEYGSPVRPKIMEAEIIHMIDNLDAEMMMMTSALALVGPGEMTNKI
FALDNRSFYKPNLKDS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaattaatcaaatgaaaaaagacgaattgtttgaaggcttctaccttattaag
tcagcagatgttcgtcagacacgggctggaaagaactatcttgcctttgtctttcaagat
gagacaggcacgattgaaggaaaattgtgggatgctcagccgcataatgtggagcagttc
caagctggtcgcgtagttcatatgagcggacgccgggaggtctacaacaatacgccccag
gtcaatcaattgaccttgcgtttgcctcaaagcggggaaccgtctaatccagcagacttt
aaagaaaaacctccggtgaatccagttgatttgaaagattacctgtcggggatgattttc
aagatagaaaatccagtttggcaacgtgtggtgagggcgctctacaacaagtacgacaag
gagttttactcgtatcctgcggccaaaaccaaccaccatgcttttgagactggcttggcc
tatcatacagcaaccatggttcgattggccgagagcatctctcaagtttaccctcaatta
aatcaaagtctcctctatgcagggatcatgctccatgatcttgccaaggtactggagctt
tcaggtcctgaaaatacggaatatacggtcagggggaatctcatcggacacattgctctg
attgatgaagaaattaccaaggtcttacaagagctgaagattgatgatcaaaaagaagat
gtgattgtgttacgacatgtcattttaagtcaccatggtctattagagtatggtagtcca
gttcgtccgaaaattatggaagcagagatcattcatatgattgataatctagatgccgaa
atgatgatgatgacttcagccttggctttagtgggtcctggtgaaatgaccaataagatt
tttgccttggataaccgctccttctataagccaaatttaaaagattcctaa
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