Sinorhizobium kummerowiae: PZL22_004420
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Entry
PZL22_004420 CDS
T09063
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00540
Lipopolysaccharide biosynthesis
skm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PZL22_004420 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
skm01005
]
PZL22_004420 (waaA)
Enzymes [BR:
skm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
PZL22_004420 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
PZL22_004420 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
PZL22_004420 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
PZL22_004420 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
skm01005
]
Lipid A
PZL22_004420 (waaA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_1_2
Glycos_transf_1
Glyco_transf_4
GutM
Motif
Other DBs
NCBI-ProteinID:
WHS93307
LinkDB
All DBs
Position
3160072..3161385
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AA seq
437 aa
AA seq
DB search
MSSLRARLALSGYRWLGTAVYPFFWSYLALRAAKGKEDPARRRERYGYASAPRPQGPLVW
FHAASVGETNAVTPLIKEIRRRGIAVVLTTGTTTSARVAAERLGSAVVHQYVPLDFKPAV
SRFLEYWQPDLAIIAESEIWPMTIIELGRRHIPQVLVNGRLSDRTFARWRRRPSLADALF
ENLALVIAQSDVDAERFRTLGALPVTVSGNLKVDNEAPPHDPRDLREYRQQIGARKTWAA
ISTFEGEENAAGTVHQALKERTGLLTIIVPRHPERCDAIEAALVAKGLKVARRTRGDPVT
PEVDILLGDTIGEMGLYLRLTEVAFVGRSLFAEGGQNPLEPAMLGCAVLSGGNVQNFRET
YQMLAKNGSAKIVRDTEMLAKGVNYLLANDDMRRSMIDAGLETVQQMRGALTATMKGLDP
YINPLVVKARLEPRPEA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctgcgcgcaaggctggcactttccggctatcgctggctcggaacggccgtc
tatcccttcttctggtcctatcttgcgctccgcgcggcgaagggcaaggaggacccggca
cgccggcgcgaacgctatggctatgccagtgcgccgcgtccccagggccctctcgtctgg
tttcacgccgccagtgtcggagagacgaatgcagtcactccgctgattaaggagatccgc
cgccgcggcatcgccgtggtgctgaccaccggtaccacgacctcggcgcgggtcgctgca
gagcgattgggctcggccgtcgtgcaccagtatgtgccgctcgatttcaagccggcggtg
agccgtttcctggaatattggcagccggatctggcgatcatcgcagaatcggaaatctgg
ccgatgacgatcatcgagctcggccggcgccatattccgcaggttctggtcaatggacgc
ctttccgaccgcaccttcgcccgatggaggcgccggccgtcgcttgccgatgctctcttc
gaaaatctcgcgctcgtcatcgctcagtccgatgtcgacgcggagcgtttccgcacgctc
ggtgcgctcccggtcaccgtctccggcaacctcaaggtggacaacgaggcgccgccgcac
gatccccgggacctgcgcgaataccgccagcagatcggtgcccgaaagacctgggctgca
atctcgaccttcgagggtgaggagaatgcggccgggaccgtccaccaggcgctgaaggag
agaaccggcctgcttacgatcatcgttcctcgccatccggagcgttgcgacgcgatcgag
gctgccctggtcgcgaaggggttgaaggtcgcgcgccgcacgcgcggcgatccggtcaca
cctgaagtcgacattctactcggcgatacgatcggcgagatggggctctatctgaggctg
acggaagtcgctttcgtcggacgttcgctattcgccgagggcggccagaacccgctcgag
ccggcaatgctcggctgcgcggtgctttccggcggaaacgtgcagaatttccgcgagacc
taccagatgctcgccaagaacggcagcgccaagatcgtgcgcgatacggagatgctcgcc
aagggtgtcaactacctgctcgccaacgacgacatgcgtcgctcgatgatcgatgccgga
ctcgaaaccgtgcaacagatgcggggcgcgctgacggcgacgatgaaggggctcgatccc
tacatcaacccgctggtggtgaaggcgcggctggagccgcgcccggaagcctga
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