Saccoglossus kowalevskii (acorn worm): 100366909
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Entry
100366909 CDS
T04123
Name
(RefSeq) tRNA wybutosine-synthesizing protein 1 homolog
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sko03016
]
100366909
Enzymes [BR:
sko01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
100366909
Transfer RNA biogenesis [BR:
sko03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100366909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Hydrolase
Motif
Other DBs
NCBI-GeneID:
100366909
NCBI-ProteinID:
XP_002734220
LinkDB
All DBs
Position
Un
AA seq
699 aa
AA seq
DB search
MSWYEYLVSCFWQSQFTVYIITALIATLVSLLINRRQKSKDLQSTDRIIQKSSVPDNNVK
KGLKIFYASQTGTAKSFSEKLSNDVSTFGVRSEVIDLSQYEPEDNLVEETDGQNACVFIV
ASYIDGKPPDKCDWFFKWMEEASNDFRVQKTMLKGLKYTVFGLGNSLYKENYNKVGVNLD
KWLHTLSGDRIMSCGEGNDNVADSKHGGVEEDFKAWKEMFLQKMLPFLQGTPGCQDDDDC
HCHGDVNKEATYETSSDEGEDLDNDGEERLRKTDGVVDVEDLGAMMGQMELSTVDTEMEN
GVVMVNGGVARKAKNKKIEAKEMMTPLLRQSLTKQGYKLIGSHSGVKLCRWTKSMLRGRG
GCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWKWKMDDAQTILDGAMKN
HYQLIKQFRGVPGVQLERFQEAMRVKHCALSLVGEPIMYPEINKFVKLLHRHEISTFLVT
NAQFPDAIKDLVPVTQLYVSVDASTKESLKKIDRPLFRDFWPRFIESLKALSEKGQRTVY
RLTLVKSWNVEEIQAYADLVQIGRPDFIEIKGVTYCGESKASSLTMENIPWHREVVSFVQ
KLTDQLPGYDIACEHEHSNCVLIANKKFKVDGEWWTWIDYDKFHELIKTFENSDGAATFT
AEDYMAKTPNWAVFGCDERGLDPVETRFHRKKKKDISGC
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggtatgagtatcttgtatcatgtttctggcagagtcaattcactgtctacata
attacagcattgatcgctactctagtcagtttactgatcaatagaagacagaaatccaaa
gacctacagagtacagatagaattattcaaaaatcaagtgtcccagataataatgtaaag
aaaggtttgaagatattttatgcatctcagacagggacagctaagagtttctcagaaaaa
ttgagcaacgatgtcagtacatttggggtgaggtcagaggtaattgacctgagtcaatat
gaacccgaagataatctggttgaagaaacagatggacagaatgcgtgtgtattcattgtt
gcgtcgtacatagacggcaaacccccagataagtgtgactggttctttaaatggatggaa
gaagccagcaatgatttcagagtacagaagacaatgttgaaaggattaaaatatacagtc
tttggtttaggaaactcactctataaagaaaactataacaaggttggtgtaaatctggat
aaatggctgcatacactaagtggtgataggattatgtcgtgtggtgaaggcaacgacaat
gtagctgacagtaaacatggaggagttgaagaagacttcaaagcttggaaggagatgttc
ctccaaaaaatgctgccattcttgcaaggaacaccaggttgtcaagatgatgatgattgc
cattgtcacggtgatgtgaataaagaggcaacatatgaaacatccagtgatgaaggtgaa
gatttggataatgatggagaagagagactgaggaaaactgatggggtggtggatgtagag
gatcttggtgcaatgatgggacagatggaattatcaacggttgatacagaaatggaaaat
ggcgttgtcatggtgaacggtggtgtagcaagaaaagcaaaaaacaaaaaaatagaggcc
aaagaaatgatgacaccattgctgagacaatcactgactaaacaaggttacaaacttatt
ggcagccattcaggggtgaagctttgccgatggactaagagtatgctaagagggcgaggt
ggttgttataaacatacattttatggtatcgagagtcaccggtgcatggagacaacacca
agtctagcatgtgctaacaaatgtgtgttctgttggagacatcacactaatcctgttggt
actgaatggaaatggaagatggacgatgcgcaaactattctggatggggccatgaagaat
cattaccaactcatcaaacagttcagaggtgtgccaggagtacagttagagcgattccaa
gaagctatgcgggtgaaacactgtgccttgtcattggtcggagagccaataatgtaccca
gaaatcaataaatttgtgaaattactacatagacatgagatctcaactttccttgtcact
aatgcacagtttcctgatgctatcaaagatctggtgcccgtcactcagctgtatgttagt
gttgatgccagtaccaaggaaagcctcaagaagattgatagacctctatttagagacttc
tggccaagatttattgagagcctcaaagcactttcagaaaagggtcagaggactgtttac
cgactaactcttgttaaatcatggaacgtggaggagatacaggcatatgctgatctagta
cagattggaagaccagactttattgaaataaagggtgttacttattgtggagagtcaaaa
gcgagcagtctgactatggaaaatattccatggcacagagaagtggtgtcgtttgtacaa
aaactgacagatcagctacctggctatgatatagcgtgtgaacatgaacattctaactgt
gtactgatagccaataaaaagttcaaagtagatggtgaatggtggacatggattgactat
gataaattccatgagttaatcaaaacgtttgaaaatagtgacggtgctgcaacattcact
gcggaggattacatggcgaaaacaccaaattgggcagttttcggttgtgatgaacgtgga
ttagatcctgtagaaacaagattccataggaaaaagaaaaaggatatttcaggatgctga
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