Saccoglossus kowalevskii (acorn worm): 100369346
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Entry
100369346 CDS
T04123
Name
(RefSeq) putative ATP-dependent RNA helicase an3-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100369346
03041 Spliceosome [BR:
sko03041
]
100369346
03036 Chromosome and associated proteins [BR:
sko03036
]
100369346
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100369346
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100369346
mRNA cycle factors
Common to processing body (P body) and stress granule
100369346
Spliceosome [BR:
sko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100369346
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100369346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
100369346
NCBI-ProteinID:
XP_006823432
LinkDB
All DBs
Position
Un
AA seq
738 aa
AA seq
DB search
MSNGANQHGQSLDQQFAGLDLNSSSVVDTRGRGQGSQRSKYIPPHLRGSGGHQPANNYSG
GGGGYYQQQQQQPQQGVRDPQDLYRRGNSGGIGGAYTGYDGYFSPAFGGQPQVYPRGGYT
GGNDYMRGPPQPQPQYSNFNRRETDRPGSGRYNNQGGYNNRGGYNGGYNDRGGYSRGGYN
NRDRGGYSGQGGNTYSNNRWSRDERIGGEPPNVDPPSSDDWTKLLPRNERLERELFSGTS
TGINFDKYEDIPVEATGESIPEPVSEFSDIDLGEIIQSNIKNSTYARPTPVQKYALPIIR
LKRDLMACAQTGSGKTAAFLLPILSQIYENGPGKIPEVMSEPGTQSRYARRKHFPLGLVL
APTRELASQIYDEARKFSYRSHVRPCVVYGGADVGGQMRELDRGCHLLVATPGRLVDMME
RGKIGLDQIKWVVLDEADRMLDMGFEPQIRRIVEQDTMPKTGERQMLMFSATFPKEIQIL
ARDFLDNYIFLAVGRVGSTSVNITQKVVWVDENDKRSFLLDLLSATGSDSLTLVFVETKK
GADSLEDFLYRDGHRATSIHGDRSQREREEALRSFRTGQTPILVATAVAARGLDIPNVKH
VINFDMPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNVVRDLLELIMETKQEVPSWLE
SMAYEAKQSGGGRRGAPRNRYGSGGFGSRDYRQGNRGRGSGTPVYGNAAFTGYQQFTGNS
YGGNYQPQAAPSTDWWGS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatggggccaatcaacatggacagagtctagatcagcagtttgcaggtctagac
ttgaactcttcttctgtagtggatacaagaggaagaggacagggtagtcaacgtagcaag
tatattcctcctcatttacgtggtagtggtggacatcaaccagctaataattactccggt
ggtggtgggggttactaccagcaacagcagcaacaaccacagcagggtgttagagaccca
caagacctgtaccgcagagggaatagcggtggcattggtggtgcctacactggctatgat
ggctatttctctcctgcctttggaggccagccacaagtctaccctagaggtggctacact
ggaggcaatgactatatgagggggcctccccagccccagccccagtatagtaattttaat
cgcagagagactgaccgaccaggaagtgggcggtacaataaccaaggtggttataataat
cgtggtggttacaacggcggttacaacgaccgcggtggctatagcagaggtggttacaat
aatcgtgaccgtggtggatacagtggccagggtggcaatacttacagcaataatcgctgg
agtcgtgatgaacgtattggaggtgaaccaccaaatgtggatccacctagttcagatgat
tggacaaaactactgccgaggaatgaaagactagagcgggaactgttcagtggcactagc
actggcatcaattttgataaatatgaggatattccagtggaggctactggtgaatcgatc
cctgaaccggtctctgagttctcggatatcgatcttggagaaattattcaatccaatatt
aagaatagtacatatgcacgtccaacaccagttcagaagtatgccttgcctattatcaga
ttaaaacgtgatcttatggcatgtgctcaaacaggctctgggaagacagcagcattcctc
ctgcctatattatctcaaatatatgagaatggaccaggtaaaataccagaggtaatgagt
gaacctggtacccagtcccgatatgctcgtcgaaaacacttccccttgggacttgttttg
gcaccaactagggaacttgcttctcaaatttatgacgaagcccgaaagttctcctaccga
tctcatgtgcgtccatgtgttgtgtatggaggtgctgatgtgggtggtcagatgcgagaa
ttagatcgtggttgtcatctcttggtagctactcctggacgtctggtggacatgatggaa
cgcggaaaaattggactagatcaaataaagtgggtagtcctagatgaggctgatagaatg
ctcgatatgggttttgaaccccagataagacgcattgtggaacaggataccatgccaaag
acaggggaaagacagatgcttatgttcagtgctacatttcccaaagaaattcagattcta
gcccgtgattttctggataattacatatttttggcagttggccgtgttggaagtaccagt
gtaaacattacacaaaaagtagtttgggtagatgagaatgacaaaaggtcattcttgttg
gatcttttatctgccacaggttctgattccctgacactggtgtttgtggaaactaaaaaa
ggagccgactctttagaggacttcctgtaccgagatggtcatcgtgctacaagtattcat
ggtgatcgctcgcaaagagagcgcgaagaagctctacgtagtttccgtactggacaaact
cccattctcgttgctacagctgtagcagcccgtggtctggatattcccaatgttaaacac
gttatcaactttgacatgcccagtgatattgaagaatatgtacatcgtattggtcgtact
ggtcgcgtcggaaatttaggtctggcaacttcattctttaatgacaagaatcgaaatgtg
gtacgtgacttgttggaattgatcatggaaaccaaacaggaagtgccatcctggctagag
tcaatggcatatgaagctaaacaaagcggtggtggtagacgtggtgctccacgtaacaga
tatggcagtggtggatttggttcccgtgattatcgtcaaggtaaccgtggtcgtggcagt
ggaactccagtttatggaaatgctgcctttactggatatcagcagtttactggcaacagt
tatggtggaaattaccagcctcaagcagccccatctactgactggtggggaagttaa
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