Saccoglossus kowalevskii (acorn worm): 100378231
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Entry
100378231 CDS
T04123
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sko01002
]
100378231
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sko04121
]
100378231
Enzymes [BR:
sko01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100378231
Peptidases and inhibitors [BR:
sko01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100378231
Ubiquitin system [BR:
sko04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100378231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
DUF3394
Motif
Other DBs
NCBI-GeneID:
100378231
NCBI-ProteinID:
XP_006819696
LinkDB
All DBs
Position
Un
AA seq
1453 aa
AA seq
DB search
MLPGESNQLVATEVSCVADAPKILCIIRDTTNPQWQTCNITINLPASCPCRELHDEVARH
ANYETDSFSLVWIRGGQDTDEILLNGLGEKTLLECGMQPNKIKNYLQIRDRDGEQPIPIP
VSKDVSTCTEESISWMHHHLYTVLVTIHIPILITSAVKVDTGFVGLVNQAMTCYLNSLLQ
TLYMTPEFRNALYRWEFDATEEEEMTSIPFQLQKLFIQMQTSKKKSVETTEVTKSFGWDS
SEAWQQHDVQELCRVMFDALETKFKNTEQSDLINQLYQGKMKDYVKCLECGYESARTDSF
LDIPLTIRPFGSTQSFLSVGQALHAFVQPETLEGSNQYFCEKCNKKCDAHKGLKFLKFPY
LLTLQLKRFDFDYTTMHRIKLNDQMTFPEIIDLSHFITDDIKNKVDADSNTDSGAENEDS
SHSNNSSDCQQDGVDEGIDIKSTNSEMANEQSSASSEMANGQSSASSEMANGQNSSSSEM
ANEKQSASSEKTNEQSKSQQDKGPSYELFSIMVHSGSAAGGHYYAYIKSFTDGQWYCFND
QHVTTITQDDIRKTYGGSVSGYRGYYSSAYSSSTNAYMLMYRQVQPDKNKAFIKESDFPP
HIVSLVEDLKQQEEIEKRQRELDRNTCKIKLFGFNSDKNKTLERKLEVHKDKTLKEATEL
AHKLLELDDVPLELCRLIKYDEFHDSLEKSFEGEEDTTMGVLLGGVKSTYSFDLLLETRR
AEQTFQVYKPGGVTVKVYEVDILADIIHPPITVRAHLEQTVQEFKQLLAQVTGKNNEMRV
ILERYYNDLRMLTVPNKTLKGEGFFRSNKVFIECEDIEDALLPLLESRLYEIIDRHAHTI
RVFISLPHTVPDVDDSDAMQVMSEEHAVNIAQDHHRPDSITRERPDTIKDILQSNDDITT
DVVRSVADKLSQLNSGSTDRTIRDDGTDQSAGENCSNNGTDTVETASVSDSDHNNQNNVE
STLATVDKAVLNKENVASGDHNSSTITGASTRSSAACTQDAIHGEELMFSDPLKVTEQCK
IMHSVDDTAACKQRGIDSMQEISTRARSASAPVQTAKYSDSEINSEVSSVCDNCNKVALP
VQEVQLCASGKETLSNTVVDNTEAKEKRNVKSKKKSYIKIEKYKHDDSVLMVCLDKRVSL
GILKKSLEPYVGVASPDFKVYRVYPNNQEFECVRLNENLTSYGDDSKIAVRLGRALKKGE
YRVKVYQLLVNDPEPCKLLFEWIFAKGMTVLESKQQIIEEMNRMYDTDTPVERCRMRKKT
WKNPGTIFLNDQIYEDDIPIYSNWEIFVEILPGIKKMMSMAQLSLFSKRWRPSDLSLDSF
QEIILENSTVEELKKRLSEVSGLDPEVIEFAKGRGTFPCEVPILDMQTELEWEPPVLLLN
VNPLYISDDGQVIYYRDNREELKEISDEEKKSIQKKENAKWVNSTQRVTYSPKKERALKI
YTDSSPPTPKNED
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaggagaaagtaatcagctcgtagcaactgaggtttcgtgcgtagctgatgca
cccaagattttgtgtattattcgagatactaccaatccacaatggcagacatgcaatatt
acgataaatttaccagccagttgcccttgtcgtgaactacacgatgaagttgctcggcat
gctaactatgaaacagacagtttctcattggtgtggatcaggggagggcaagacactgat
gagattttgctgaatggtcttggtgagaagacgctattggaatgtggaatgcagcctaat
aaaattaaaaactacctccaaataagagacagagatggggaacagccaatacccatacca
gtcagtaaggatgtaagtacatgtacagaagaaagcatatcatggatgcatcatcatcta
tatacagtgctagtgactatccatattcctatacttattacatcagcagtcaaggtagat
acgggttttgtaggactagtgaatcaagctatgacctgctacctcaacagtctgctacaa
acactttacatgaccccagagttcaggaatgccctctacagatgggagtttgatgctact
gaagaggaagagatgacaagcatcccgtttcaactccaaaaactgtttatacaaatgcag
actagcaagaagaagtcagtggagacgacggaagtcacaaaaagctttggatgggacagc
agtgaagcttggcaacagcacgatgtgcaggaactatgtcgtgtcatgtttgacgcttta
gagacaaagtttaagaacacagaacaatctgatttgattaatcagttgtaccaaggcaaa
atgaaagattatgtcaagtgtttggagtgtggttatgagagtgcaagaaccgattccttc
cttgatattcctctaaccattagaccatttggttcaacacagtcttttttaagtgtgggc
caggcactacatgcatttgtccaaccagaaactttagaaggtagtaatcagtatttctgt
gagaagtgcaataagaagtgcgatgctcacaaaggattgaagttcttgaagttcccatat
ttactaacattgcaactgaaacgatttgactttgactacactactatgcacagaatcaaa
ttgaatgaccagatgacgtttccagagattattgatctaagtcatttcatcacagatgat
attaagaacaaggttgatgcagatagcaatactgacagtggtgctgaaaacgaggacagt
tcccatagcaacaacagcagtgactgtcagcaggatggtgtggatgaaggcattgatatt
aaatctacaaatagtgaaatggctaatgaacaaagtagtgccagcagtgaaatggctaat
ggacaaagtagtgccagcagtgaaatggctaatggacaaaatagttccagcagtgaaatg
gctaatgaaaaacaaagtgccagcagtgaaaagactaatgaacaaagtaaatcacaacaa
gataaaggtccatcatatgaattattttctatcatggtgcattctggtagtgctgcaggg
ggacattattacgcctatatcaaatctttcactgatggtcagtggtattgtttcaatgac
caacacgtcacaacaataacgcaagatgatatcaggaaaacgtatggcggctcagtgagt
ggttaccgtggttactactccagcgcctattccagctccaccaatgcctacatgctaatg
tacaggcaagtgcaacctgataaaaacaaagcattcatcaaggaaagcgacttccctccc
catattgtatcactggtagaagacttgaaacaacaggaagaaattgaaaaaagacagcgg
gaattagaccgcaacacttgcaagataaagctgtttggatttaattcagataagaataag
actttggagagaaagttagaagtccataaggataaaactttgaaagaagccacagaatta
gcgcacaagttgttggaacttgatgacgtgccactcgaattatgtcggctcattaaatac
gacgagttccatgattcattagagaagtcatttgaaggggaagaagacaccacgatggga
gtgttactcggtggggtcaaatcaacatattcctttgacttactcctggagacgagaaga
gccgaacaaacattccaagtgtataagcctggaggagttacggtgaaagtgtatgaagtg
gatatcttggctgatatcatccatccccctatcactgtgcgagctcacttagaacaaaca
gtgcaagaattcaaacagttactagcacaggttactggtaaaaataatgaaatgcgtgtg
atattagaaaggtattacaacgatttacgaatgttaacagtacctaataaaacccttaaa
ggtgaagggtttttcagaagcaataaggtgtttattgaatgtgaagacatagaagatgca
ttactgccattgctggaatcaaggctgtatgaaatcatagaccgccatgctcacacaata
cgtgtctttatatcactacctcatacagtaccagatgttgatgacagtgacgccatgcag
gtaatgagtgaagaacatgctgtcaacattgctcaggaccaccacaggcctgacagcatc
accagggagaggcctgacaccattaaggacatcctacaatctaacgatgatatcaccaca
gatgttgtaaggtctgtggcggataaactaagccagttgaattcaggctccacagacagg
acgataagagacgatggcacagatcaaagtgctggcgagaactgtagcaataatggaaca
gatacagtcgagacagcgtctgtgagtgattcggatcataataatcaaaacaatgttgag
agtacgttagctactgtggataaggctgttttgaataaggagaatgtggctagcggtgac
cataatagcagtacaataactggtgcctccactcgtagcagtgctgcgtgtacacaggat
gctatacatggagaggaacttatgttcagtgatccactgaaagttacagaacagtgtaaa
attatgcactccgtcgatgatactgcagcttgcaaacaacgtggcatcgatagcatgcag
gagatatccacgagagcgcggtccgcgagtgccccagtgcagactgccaaatacagtgat
tccgaaattaactctgaagtctccagcgtgtgtgacaattgcaataaagtggcacttcca
gtgcaagaagtgcagctatgtgcttctggtaaagaaactctcagcaatacggtagttgat
aatactgaagccaaagaaaaaaggaacgttaaatcaaagaagaaatcttacatcaaaatt
gagaagtacaaacatgatgattcagtactaatggtgtgtctggacaagagagtatcactt
ggtatcttaaaaaaatccctggaaccctacgttggtgtcgcatctcctgattttaaggta
tatagagtatatcctaacaaccaggagttcgagtgtgtgcgacttaatgagaatctgaca
tcctatggtgatgatagtaaaatagcagtgagactcggaagagctctgaagaaaggtgaa
tacagggtaaaagtataccaacttctagtaaacgatccggagccatgtaagctgttattt
gagtggatatttgcaaaaggaatgacagtattggaatccaagcagcaaatcatagaagag
atgaatagaatgtacgatacagatacacctgtagaaaggtgccgcatgagaaagaaaaca
tggaagaatccaggcacaatattcctaaatgatcagatttatgaagatgacatcccaatt
tattcaaattgggagatatttgtagaaatactaccaggtataaaaaaaatgatgtctatg
gcacagttgtccttattttccaagcgatggcggccttctgatctatccctggattcattt
caggagataatcctggaaaactccactgttgaagagctgaaaaagaggctttccgaagta
agtggattggatccggaagtcatagaatttgctaaaggaagaggaacatttccatgtgaa
gtacctatattagatatgcagacagagttagaatgggaaccaccagtgttattactcaat
gttaatcctttgtatatatcggatgatggccaagttatatattacagagataaccgtgaa
gaactgaaagaaatctctgatgaagagaaaaaatccatccagaaaaaagaaaatgcaaaa
tgggtgaattcaacgcaacgtgtaacttactctccgaagaaggaaagagcactaaagatc
tacactgactcttctccgccaactccaaaaaatgaagactaa
DBGET
integrated database retrieval system
