Sphingomonas koreensis: BRX40_09640
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Entry
BRX40_09640 CDS
T04828
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skr03009
]
BRX40_09640
Enzymes [BR:
skr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BRX40_09640
Ribosome biogenesis [BR:
skr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BRX40_09640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
APR52653
UniProt:
A0A1L6J9N4
LinkDB
All DBs
Position
complement(1972623..1973768)
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AA seq
381 aa
AA seq
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MSDASQNVRQFTVGIDDDGIRLDRWFKRHLPDASFNIVSRWARTGQLRVDGARATPGDRI
QAGQVIRVPPAEPVQAATAKPKKARPQLTPEQMEFAESMVIHRDAQAMVINKPPGLATQG
GTKTHDHVDQLLDGLYFDLDTRPKLVHRLDKDTSGALVLARTARAAAYFSKSFSGRTARK
TYWAIVMGVPSIEDGFIDLPLGKQPGTGGEKMQVDEEEGQPARTRYRVIDRAGNRAAWVE
LQPHTGRTHQLRVHMAAIGHPIVGDGKYGLAEAFLSGSISRKMHLHSRRIRIDHPDGGKL
DVTADLPTHFAETLTQLGFDIERGDNMPPDERAPMSREQEKAKAKAHAKTYRKERRGERR
GRGEKAEKSGKPAKPAKPKKK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcttcgcagaacgtccgccagttcaccgtcggcatcgacgatgacggcatc
cggctcgatcgctggttcaagcggcacctgcccgatgccagcttcaacatcgtctcgcgc
tgggcgcgcaccggccagctccgcgtcgatggcgcgcgcgccacacccggcgaccgcatc
caggccggacaggtgattcgcgtacctccggccgaacccgtgcaggcggccacggcaaag
ccgaaaaaggcccgcccccagctcacgcccgagcagatggagttcgccgaatcgatggtc
atccatcgcgacgcgcaggcgatggtcatcaacaagccacccggcctcgcgacacagggc
ggcacgaagacccacgaccatgtcgatcagctgctcgacggcctttatttcgacctcgat
acccggcccaagctggtccaccggctcgacaaggatacgtcgggcgcgctcgtcctcgcc
cgcaccgctcgtgccgccgcctatttctccaagagcttttccgggcgcaccgcgcggaaa
acctattgggcgatcgtcatgggcgtgccgagcatcgaggacggcttcatcgacctcccg
ctcggcaagcagccgggcaccggcggcgagaagatgcaggtggacgaggaagagggccag
cccgcgcgcacccgctatcgcgtgatcgatcgcgccggcaaccgcgccgcctgggtcgag
cttcagccgcataccgggcgcacgcaccagctgcgtgtccacatggcggcgatcggccat
ccgatcgtcggcgacggcaagtacgggctagccgaggcgttcctgtcgggcagcatctcg
cgcaagatgcaccttcattcgcggcgtatccgcatcgatcatcccgatggcggcaagctc
gacgtgacggcggatctgcccacccacttcgccgaaacgcttacccaattgggcttcgac
atcgagcgcggcgacaacatgccgccggacgagagggcgccgatgtcccgcgagcaggaa
aaggcgaaggccaaggcgcacgccaaaacctatcgcaaggaacgccgcggcgaacggcgc
ggccgaggggaaaaggccgagaagtccggaaaaccagcgaagcccgcaaagccgaagaag
aaatga
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integrated database retrieval system