Sphingomonas koreensis: BRX40_13020
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Entry
BRX40_13020 CDS
T04828
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00550
Peptidoglycan biosynthesis
skr01100
Metabolic pathways
skr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BRX40_13020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BRX40_13020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
skr01011
]
BRX40_13020
Enzymes [BR:
skr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BRX40_13020
Peptidoglycan biosynthesis and degradation proteins [BR:
skr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BRX40_13020
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
APR53222
UniProt:
A0A1L6JBB5
LinkDB
All DBs
Position
complement(2706630..2708666)
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AA seq
678 aa
AA seq
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MNGPVRLISEAQQSYSFSRRALFLGAAQVTGGLILAARMTWLSVYENDKYRLLAESNRVN
LTLIPPRRGWIVDRAGVPIANNRTDFRVDIIPDRMEKESRGRVLAALRDLLALTAEDLVR
IEEDLKGAAGFQPVQVAENLDWERFAAVSVRLPELPGVAPTRGFARNYPAGAAVAHLVGY
VGAATAEQFKASKDPLLLTPGFKLGKDGLEKVLEGELRGKPGAKRVEVTARGKLVRELAT
RPDEPGKTVRLTIDAGLQEYAARRLGNESGSVTVFDVTNGDILAMVSMPAYDPNAFSDGI
SRTEWKMLSEDDHLPLMNKTLQGLYPPGSTFKPATALAILSAGIDPKRVVYCNGGYQLGN
RRFGCLGRHGPMTMHTAIARSCNTYFYTLGREIGIEAIAAAARKLGFGAEFELPLPSQRY
GTIPDSAWKMRRYKQEWTQADTLNAAIGQGYVLVSPFQLALSAARIASGHELIPSLLAAK
RAAPRHLDFPEEHLAIVRAGMDEVVNGRGTAGASKLRLDGIRMGGKTGTAQVRRIMDRNR
GQGGEWKYRDHGLFVCFAPVDNPRYAASVVIEHGMGGARAAAPVAKDVLTWLFDRQQALD
TLARFETEWGGDIRARMAAKDRAYRAAQGLPAAAPTPGATPTPAPSPTPSTTPAPTPRAT
ATPAAAPSPTSSPQVPTE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcccggtacgcctgatcagcgaggcgcagcaaagctacagtttctcacgccgc
gcgctgtttctgggcgccgcacaggtgacgggcgggctgatcctcgccgcgcgcatgact
tggttgtccgtctacgagaacgacaagtaccggctgcttgccgaaagcaatcgcgtcaac
ctgaccctgattccgccgcgccgcggctggatcgtcgatcgcgctggcgtaccgatcgcc
aacaaccggaccgatttccgcgtcgatatcatcccggaccggatggagaaggagagtcgc
ggccgcgtactggcagcactgcgcgatctccttgccctgaccgcagaagacctggtccgg
atcgaggaggatctgaagggagcagcgggcttccagcccgtgcaggtcgccgagaatctc
gactgggagcgtttcgcggcggtcagcgtgcggctgcccgaactaccgggcgttgcccct
acccgcggcttcgcgcgcaactatccggccggcgctgcggtggcccatctcgtcggttat
gtcggcgccgcgaccgcggagcagttcaaggcgagcaaggatccactgctcctcacaccc
ggcttcaagctcggcaaggatggccttgagaaggttctggaaggcgaactgcgcggcaag
cccggcgccaagcgcgttgaggtcactgcgcgtggcaagctggtccgggagctggccacg
cgccctgacgaaccgggcaagaccgtgcggctcacgatcgacgcggggcttcaggaatac
gccgcgcggcgccttggcaacgaatccggctcggtcacggtgttcgacgtcaccaatggc
gacattctcgcgatggtgtcgatgccggcctacgaccccaacgccttctcggacgggatc
agccgcaccgagtggaagatgctgtcggaagacgaccatctcccgctgatgaacaaaacg
ctccagggcctctacccgcccggatcgaccttcaagcccgccaccgcgctggcaatcctc
agcgccgggattgacccgaagcgggtggtctattgcaatggcggctaccagctcggtaat
cggcgcttcggctgtctgggccgacacggcccgatgacgatgcacaccgcgatcgcgcgc
agctgcaatacctatttctacaccctgggccgcgaaatcggcatcgaggcaatcgccgcc
gccgctcgcaagctcggcttcggcgcggagttcgagctgcccctgccctcacagcgctat
ggcaccatcccggacagcgcgtggaagatgcgccgctacaagcaggaatggacccaggcg
gacacgctcaatgctgcgatcggccagggctatgtgctggtcagcccgttccagctggcg
ctgtccgccgcgcgcatcgcgtcgggccatgagctgatcccgtcgctcctcgcggccaag
cgcgccgccccccggcatctcgactttcccgaagagcatctcgctatcgtccgcgcggga
atggatgaagtggtgaacggccgcggcaccgccggcgcctcgaaactgcggctcgacggc
atccgcatgggcggcaagaccggtacggcccaggtacgccgcatcatggaccgtaatcgc
ggtcaaggcggcgagtggaagtatcgcgaccacggcttgttcgtctgcttcgccccggtc
gacaacccccgctacgccgcctcggtcgtcatcgaacatggcatgggcggtgcccgcgca
gcagcacccgtggcgaaggacgtgctcacctggctcttcgaccggcagcaagcgctggat
actctcgcccggttcgaaacggagtggggcggcgacatccgtgcccgcatggctgcgaag
gacagggcctatcgtgccgcgcaaggcctgcccgccgcggctccgacgcccggcgccacg
ccaactccggcgccgtccccaacgccttctacgacccccgctccgacgccacgggcgact
gcgacaccggccgccgccccctctcccacctcctcgcctcaggtacccaccgaatga
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