Salinivibrio kushneri: FCN78_08635
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Entry
FCN78_08635 CDS
T05956
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sks
Salinivibrio kushneri
Pathway
sks00521
Streptomycin biosynthesis
sks00523
Polyketide sugar unit biosynthesis
sks00541
O-Antigen nucleotide sugar biosynthesis
sks01100
Metabolic pathways
sks01110
Biosynthesis of secondary metabolites
sks01250
Biosynthesis of nucleotide sugars
Module
sks_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sks00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FCN78_08635 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FCN78_08635 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FCN78_08635 (rfbC)
Enzymes [BR:
sks01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FCN78_08635 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCP02449
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Position
1:complement(1843049..1843615)
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AA seq
188 aa
AA seq
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MQVIETTIPDVKIIEPSVFGDERGFFMETWHQQRFDEQVAGKPTSFVQDNHSKSAQGILR
GLHYQTQNTQGKLVRVVSGEVFDVAVDLRQGSPTFGQWEGIYLSAENKRQLWVPEGFAHG
FYVTSEEAEFVYKCTDFYNPTGEVTLQWDDPELGIQWPIATKPQLSHKDKNGSTLSELNR
NGSLKFSL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaattgaaacgactatccccgatgtgaaaatcattgagccgtcagtctttggt
gatgagcgggggtttttcatggaaacttggcaccagcaacgttttgatgaacaagtcgca
ggcaaacccacgtcgtttgtgcaagataatcattctaaatcagcgcagggtattttgcgc
gggttgcattaccaaacccaaaacacacaaggaaagcttgttcgcgtggtgagtggcgaa
gtgtttgatgtggccgttgacctacgccaaggctccccgacctttgggcagtgggagggg
atttatttatccgctgagaataaacgccagttgtgggtacccgaaggctttgcgcatggg
ttttatgtgactagcgaagaagcggaatttgtctataaatgcacggatttttataatcca
actggtgaagtgaccttgcagtgggacgatcctgagctaggtattcagtggccaatagca
accaaaccacaactttctcataaggataagaacggttctacgttatccgagcttaataga
aatggtagcttaaaatttagcttataa
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