Skermanella sp. TT6: IGS68_06410
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Entry
IGS68_06410 CDS
T07020
Name
(GenBank) cellulase family glycosylhydrolase
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
skt
Skermanella sp. TT6
Pathway
skt00500
Starch and sucrose metabolism
skt01100
Metabolic pathways
skt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
IGS68_06410
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IGS68_06410
Enzymes [BR:
skt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
IGS68_06410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4214
Cellulase
HemolysinCabind
CBM_2
Calx-beta
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
QQP90854
LinkDB
All DBs
Position
complement(1381493..1384363)
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AA seq
956 aa
AA seq
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MGIRTVFKLGNVWDQGFAAEILVVNDGPETVTDWHLSFTAPWVLQSWWNVTALPSPTGVT
TFGNVGMNGTLAPGQSANIGFTAQGTPAEPVFLPSAPGQADAMPYLTVTDGFAVEGDSGT
TPLTFHLSLSQASATPVTVRWETAAGGATAGTDYRTAGGTVTFAPGETRATVRIDVIGDT
VAELNETVRLVVKLAEGAVPVRWQATGTIHDDDGPSPAAPGVVADGFLSTRGNEIVDAAG
TPVRLAAVNWFGLESLRASPDGLQARNWQDMMKQMADAGFNAIRLPFSSELLDGRAPANI
NGTLNPDLVGLDGLGIIDRIVEHAGRIGLRIILDHHRSAAGDGPNQNGLWYEGAHTDQEW
MDDWVMLAQRYKGNSTVVAADLHNEPHGQATWGDGNPATDWKAAAERAGAAIQAVNPDWL
ILVEGIESYKGSWYWWGGNLQGVADHPVELPVANKLVYSPHDYPDSVHRQPWFQADDYAA
QLQGLFDTQWGFIARQNIAPVMLGEFGTRLNDPKDLVWLSKLTATLNGDLDGDGVTDAGQ
PAAGLSWAWWSWNPNSTDTGGILADDWRTVLPEKLAAIAALRGSAFAAADGGSFGDGPVG
LALAGGAGSDLLRGGAGSDLIRGEGGDDRIFGGDGDDRLYGGTGDDWLEGGAGSDLIDGG
PGIDTAIWAGPRRQHAVTFDTGGDVRVSGPDGVDTVRGVEHLVFTDGRYVTDTGDTAAQV
HRLYGAALDRAPDPGGLLAWKAALDAGALTLAQAAGGFVGSEEFRLRYGPLEDRGFVEQL
YRNVLHREGEEAGVTNWTGSLGAGLTRAEALVGFSESVENVQRTAPVIERGLWLRDDQAA
AVARLYDSAFDRLPDAGGLVGWTAAVKAGMTLHEAAGGFIGSNEFQQRYGAVDNAGFVDL
LYRNVLDRQGDPDGLRNWTGALDAGMTRTEALVGFSESVEHKMQRAPYIDDGIWFA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggtatccgtacagtcttcaagctcggcaatgtctgggaccagggtttcgcggccgag
atcctggtggtcaacgacggtccggagaccgtgaccgactggcacctgtcgttcacggcg
ccctgggtcctccagtcctggtggaacgtcaccgcgctgccctccccgacgggagtgacc
accttcggcaatgtcggcatgaacgggacgctggcgcccggccagagcgccaacatcggc
ttcacggcgcaggggaccccggcggaaccggtgttcctgccgtccgctcccgggcaggcg
gacgcgatgccgtacctgacggtgaccgacggcttcgcggtcgagggggattccggcacc
acgccgctaacgttccacctcagcctgtcgcaggcgtcggcgacgccggtcacggtgcgc
tgggaaacggccgcgggcggcgccaccgccgggaccgattaccggaccgccggcggcacc
gtgaccttcgccccgggcgagacgagggccaccgtccggatcgacgtcatcggcgacacc
gtggcggaactgaacgagacggtgcggctggtggtcaagttggccgagggggccgtcccg
gtccgctggcaggcgaccggaacgatccatgacgacgacggcccgtcgcccgcggcgccc
ggcgtggtcgccgacggcttcctgtccacccgcggcaacgagatcgtcgatgccgccggc
acgccggtccgcttggccgccgtcaactggttcggcctggaatccctgcgcgcctcgccg
gacgggctgcaggcccggaactggcaggacatgatgaagcagatggccgacgcgggcttc
aacgcgatccgccttcccttctcgtccgaactgctggacggcagggctccggccaacatc
aacggcaccctcaaccccgacctggtcgggctcgacggcctcggcatcatcgacaggatc
gtcgagcatgccgggcggatcgggttgcgcatcatcctcgaccaccaccgcagcgccgcc
ggcgacgggccgaaccagaacggcctgtggtacgagggcgcccataccgaccaggagtgg
atggacgactgggtgatgctggcccagcgctacaagggcaacagcaccgtggtcgccgcc
gacctgcacaacgaaccgcacggccaggcgacctggggcgacggcaatcccgccaccgac
tggaaggcggcggccgagcgggccggcgcggcgatccaggcggtcaatcccgactggctt
atcctggtcgaggggatcgagagctacaagggaagctggtactggtggggcggcaatctc
cagggcgtcgccgaccatccggtcgagttgccggtcgccaacaagctcgtctactcgccc
cacgactatcccgactccgtccatcggcagccctggttccaagccgacgactacgccgcg
cagctccagggcctgttcgacacccagtggggcttcatcgcgcggcagaacatcgctccc
gtgatgctgggcgagttcggcaccaggctgaacgaccccaaggacctggtctggctgtcg
aaactcacggcgacgctgaacggggatctggacggcgacggcgtgacggacgcaggccag
cccgcggcggggctgtcctgggcgtggtggtcgtggaacccgaactccaccgataccggc
ggcatcctggccgacgactggcgcaccgtcctcccggagaagctggcggccatcgccgcc
ttgcgcggcagcgccttcgccgccgccgacggcggttccttcggcgacggccccgtcggg
ctggcgcttgccggaggcgccgggtcggacctgctgcgcggcggtgccggaagcgatctg
atccggggcgagggcggcgacgaccggatcttcggcggtgacggcgacgaccgcctctac
ggcggcaccggcgacgattggctggaaggcggcgccgggagcgacctgatcgacggcggt
ccgggcatcgacaccgccatctgggcgggaccccggcggcagcatgccgtgaccttcgac
acgggcggcgacgtcagggtatcgggtccggacggcgtggataccgtgcgcggggtggag
catctggtcttcacggacggccgttacgtgaccgatacgggggataccgcggcgcaggtc
caccggctctacggcgcagccctggaccgtgcgccggacccgggcggcctgctcgcgtgg
aaggcggccctggatgccggcgcgctgacgctcgcccaggctgccggcggtttcgtcggg
tcggaggagttccggctccgctacggtccgctggaagaccggggcttcgtcgagcaactc
taccgtaacgtcctgcatcgcgagggcgaggaggcgggcgtgaccaactggaccggctcg
ctgggcgccggcctcacccgggccgaggcgctggtgggcttttcggagtcggtggagaac
gtccagcggaccgctcccgtcatcgagcggggactctggctgcgcgacgaccaggccgcg
gcggtggcccgcctctacgacagcgcgttcgaccgccttcccgacgcgggagggctggtc
ggctggacggcggcggtcaaggccggcatgacgctgcacgaggccgccggagggttcatc
ggctcgaacgagttccagcagcgctacggcgcggtggacaacgctgggttcgtcgacctt
ctgtaccgaaacgtgctggaccgccagggcgatccggacggcctgcggaactggaccggc
gccctggacgccgggatgacgcggaccgaggcgctggtcggcttctccgaatcggtcgag
cacaagatgcagcgggctccgtacatcgacgacgggatctggttcgcctga
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