Skermanella sp. TT6: IGS68_18655
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Entry
IGS68_18655 CDS
T07020
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
skt
Skermanella sp. TT6
Pathway
skt00521
Streptomycin biosynthesis
skt00523
Polyketide sugar unit biosynthesis
skt00541
O-Antigen nucleotide sugar biosynthesis
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
skt01250
Biosynthesis of nucleotide sugars
Module
skt_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
IGS68_18655 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IGS68_18655 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IGS68_18655 (rfbC)
Enzymes [BR:
skt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IGS68_18655 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QQP88071
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Position
complement(3990609..3991160)
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AA seq
183 aa
AA seq
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MEIVETEIPDVKLLTPRKFGDHRGFFVETYNRKALEGIGFTKEFVQDNHSLSVPVGTVRG
LHFQLQPYAQDKLVRVVKGAILDVAVDLRRGSPTFGRHVKARLDAESGRQILVPVGFAHG
FVTLEPDTEVIYKVTNYYAPSHDRGLLWNDPDLGIEWPVAGDQAVLSDKDKVQPRLRDLK
DAF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgttgagaccgaaatacccgacgtcaagctgctgactccccgcaagttcggt
gatcaccgtggcttcttcgtcgagacctacaaccgcaaagccctggagggtatcggtttc
acgaaggaattcgtgcaggacaaccactccctgtcggttcccgtgggcaccgttcgcggc
ctccacttccagctccagccctatgcgcaggacaagctggtccgcgtcgtcaagggagcg
atcctggacgtggcggtcgacctgcggcgcggttccccgaccttcggccggcacgtcaag
gcccgcctcgatgcggagtccggccggcagatcctggttcccgtgggtttcgcccatggt
ttcgtgacgctggagcccgatacggaggtcatctacaaggtgaccaactattacgctccc
agccacgaccgcggcctcctgtggaacgacccggatctggggatcgagtggccggtggcc
ggcgatcaggccgtcctgtccgacaaggacaaggtgcagccgcgcctgcgcgacctgaag
gatgccttctga
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