Skermanella sp. TT6: IGS68_23200
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Entry
IGS68_23200 CDS
T07020
Symbol
gcvPB
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase subunit GcvPB
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
skt
Skermanella sp. TT6
Pathway
skt00260
Glycine, serine and threonine metabolism
skt00630
Glyoxylate and dicarboxylate metabolism
skt00785
Lipoic acid metabolism
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
skt01200
Carbon metabolism
Module
skt_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IGS68_23200 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IGS68_23200 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IGS68_23200 (gcvPB)
Enzymes [BR:
skt01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
IGS68_23200 (gcvPB)
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Motif
Pfam:
GcvP2_C
Aminotran_5
GDC-P
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QQP88887
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Position
complement(4977140..4978732)
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AA seq
530 aa
AA seq
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MNTQGRKTHIDALGVEGGGAASAAAGTISGNRALMLEEPLIFEQDSPGTTGVDLPEPPAV
KSRLGQVRERGRIGLPGLSEPEVIRHYTRLSQKNYAIDSGLYPLGSCTMKHNPRLNEKLA
RLPGFSDIHPLQPERTVQGALELIDTLAHWLKTLTGMPAVAMSPAAGAHGELCGMMSIRA
AIEDRDGGTSQRRRVLVPESAHGTNPATAAACGFTVDAIPADATGRVDVEALKSKLGDDV
AAIMLTNPNTCGLFERDIVEIAEAVHAAGAYFYCDGANFNAIVGRVRPADLGIDAMHINL
HKTFSTPHGGGGPGSGPVVLSDALAKFVPLPYVVHGPDGFSLVESGADEDSTGKEFGRLK
GFHGQMGMFVRALAYILSHGADGLRQVASDAVLNANYVMASLGDVMTPSFEGPCMHEALF
DDRFLKGTGVTTLDFAKAMIDEGYHPMTMYFPLVVHGAFLIEPTETESKQSLDAFIRVMR
GLAERAKSGDADHFLGAPRMTPRRRLDETGAARKPVLRWVPEVEQREAAE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccagggacgcaagacccacatcgacgcgctgggcgtcgagggcggcggagcg
gcttccgccgcggccggcaccatcagcggcaaccgcgcgctgatgctggaagaacccctg
atcttcgagcaggacagccccggcaccaccggcgtggacctgccggagccgcccgccgtc
aagagccgcttaggccaagtgcgggagcgcgggcggatcggcctgcccggcctcagcgag
cccgaggtgatccgtcactatacccggctgtcccagaagaactacgcgatcgacagcggg
ctctatccgctgggatcgtgcaccatgaagcacaacccgcgcctgaacgagaagctggcc
cgcctgccgggcttcagcgacatccacccgctccagccggagcggacggtgcagggcgcg
ctggaattgatcgacacgctggcccactggctgaagacgctgaccggcatgccggccgtc
gccatgtcgccggcggccggagcccacggcgagctgtgcggcatgatgtcgatccgcgcc
gccatcgaggaccgcgacggcggcaccagccagcgccgccgcgtgctggtccccgaatcc
gcgcacggcaccaacccggcgacggccgccgcctgcggcttcaccgtggacgcgatcccg
gccgacgccaccggccgggtcgatgtcgaggcgctgaagtccaagctgggcgacgacgtc
gccgcgatcatgctgaccaacccgaacacctgcgggctgttcgagcgcgacatcgtcgag
atcgcggaagcggtgcatgcggccggcgcctatttctactgcgacggcgccaacttcaac
gccatcgtcggccgggtccgtcccgccgacctcggcatcgacgcgatgcacatcaacctg
cacaagaccttctccacgccccacggcggcggcggcccgggcagcggtccggtcgtactg
tccgacgcgctggcgaagttcgtgcccttgccctacgtggtccacggcccggacggcttc
tccctggtcgagagcggtgcggacgaggactccaccggcaaggagttcggccggctgaag
ggcttccacgggcagatgggcatgttcgtgcgggcgttggcctatatcctgagccacggc
gccgacgggttgcggcaggtggcctccgacgccgtgctcaacgccaactacgtgatggcg
agcctgggcgacgtgatgacgccgtcgttcgaggggccgtgcatgcacgaggcgctgttc
gacgaccgcttcctcaagggcaccggggtgaccacgctcgacttcgccaaggcgatgatc
gacgagggctaccaccccatgaccatgtatttcccgctggtcgtccacggcgccttcctg
atcgagccgaccgagaccgagagcaagcagagcctggacgccttcatccgcgtgatgcgc
ggccttgccgagcgcgccaagtccggcgacgccgaccacttcctcggtgccccgcggatg
acgccgcggagacgcctggacgaaacgggcgcggcccgcaagccggtgctgcgctgggtg
ccggaagtggagcagcgggaggcggcggagtaa
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