Skermanella sp. TT6: IGS68_33105
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Entry
IGS68_33105 CDS
T07020
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
skt
Skermanella sp. TT6
Pathway
skt00290
Valine, leucine and isoleucine biosynthesis
skt00660
C5-Branched dibasic acid metabolism
skt01100
Metabolic pathways
skt01110
Biosynthesis of secondary metabolites
skt01210
2-Oxocarboxylic acid metabolism
skt01230
Biosynthesis of amino acids
Module
skt_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
IGS68_33105
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
IGS68_33105
Enzymes [BR:
skt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
IGS68_33105
4.2.1.35 (R)-2-methylmalate dehydratase
IGS68_33105
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Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
QQP93463
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Position
pTT6-2:360563..361831
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AA seq
422 aa
AA seq
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MGMTLTEKIIARHAGLDHVKPGQIVSAKVDLCMANDATMRLNVDIFENKVKATRVFDPDR
VILIMDHQVPADSPQTAEVHDLSRRFAERYGLTYFYETEGICHQVMVEKHVEPGMLVVGA
DSHTNSYGVIGAVSCGMGSTDVVAVMVRGETWLQVPHSVKVELTGSLGAGVYGKDVILNL
IKRTTVSGLTYKAVEFAGPGLDGIPVPQRFTLCNMTTETGAKSSMIAPDAATYDYIRAVR
GSAPEPDPTLFSDPDAVYEQTYRIDLGSLTPQVARPHSVDNVVDVGETAGIAIDQAFLGA
CTNARIEDLREAAKIMGGRKVAKGVRFMVTPASRSVYLQGMREGLLDTFMSAGAIVNHPG
CSACWGACQGVLAAGQTMISSGNRNFKGRAGSADSNIYLSSPATVAASAIAGKITDPREF
LP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgacgctcaccgagaagatcatcgcgcggcacgccgggctggaccatgtcaag
ccggggcagatcgtctcggccaaggtcgacctgtgcatggccaacgacgcgaccatgcgg
ctcaacgtcgacatcttcgagaacaaggtcaaggcgacccgggtgttcgaccccgaccgg
gtgatcctgatcatggaccaccaagtgccggccgactcgccccagaccgccgaggtccac
gacctgtcccgccggttcgccgagcgctacggcctgacctatttctacgagaccgagggc
atctgccaccaggtcatggtggagaagcatgtcgagcccggcatgctggtggtcggcgcc
gacagccacaccaattcgtacggcgtgatcggcgcggtctcctgcgggatgggctcgacc
gacgtggtcgccgtgatggtccggggcgagacctggctccaggtgccccactcggtcaag
gtcgagctgaccggcagcctcggcgccggggtctacggcaaggacgtgatcctcaacctg
atcaagcggacgacggtcagcggcctgacctacaaggcggtggagttcgctggacccggc
ctggacggcatccccgttcctcagcgcttcacgctgtgcaacatgacgaccgagaccggg
gccaagtccagcatgatcgccccggacgccgcgacctacgactatatccgcgcggtccgc
ggctccgcgcccgagccggacccgaccctgttctccgacccggacgccgtgtacgagcag
acctaccggatcgacctgggctcgctgacgccccaggtggcccgcccccactcggtcgac
aacgtggtggacgtgggcgagaccgccggaatcgcgatcgaccaggcgttcctcggcgcc
tgcaccaacgcccggatcgaggacctgcgcgaggcggccaagatcatgggcgggcgcaag
gtcgccaagggcgtccgcttcatggtcacgccggcgtcgcgctcggtctatctccagggc
atgcgcgaggggctgctggacaccttcatgagcgccggggcgatcgtcaaccatcccggc
tgctcggcctgctggggcgcctgccagggcgtgctggcggccggccagaccatgatctcc
agcggcaaccgcaacttcaagggccgggccggcagcgccgacagcaacatctacctgtcc
agccccgccaccgtcgccgcctccgccatcgcgggcaagatcaccgatcccagggaattc
ctgccatga
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