Serpula lacrymans: SERLADRAFT_361686
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Entry
SERLADRAFT_361686 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sla
Serpula lacrymans
Pathway
sla03022
Basal transcription factors
sla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SERLADRAFT_361686
09124 Replication and repair
03420 Nucleotide excision repair
SERLADRAFT_361686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_361686
03400 DNA repair and recombination proteins [BR:
sla03400
]
SERLADRAFT_361686
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SERLADRAFT_361686
DNA repair and recombination proteins [BR:
sla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SERLADRAFT_361686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
18809863
NCBI-ProteinID:
XP_007318777
JGI:
361686
UniProt:
F8NXU2
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MPSLTTQSETLTPESIPHTLLPFLQSQSQNTLTRLYQRPSSCFSIFRLTGPLERQIIMNL
LWLESAIPIATMSAWVIREGKKLYDAALTTLANLHILPQSNVKLALNPTFKASFRQAITG
GGNSSSFGVPAEKDDKRSTNTVETLDAYALERWETILHYMVSSGQGSLPTKPSQGVLYLL
QRSGLMTQNHGSALQITSAGFQFLLHTPHDQLWDLLLQYLHMAEERQMDLVEVLSFLFML
STMDLGREYSTEGLSETQKAMLEDLRDYGLVWQRKATSKRFSPTRLATTLTSSCPPLPTS
TGTSGGPQSQGFIVLETNYRIYAYTDKPLQTAVLNLFITMKYRFPNLVVGMLTRESVKKA
LSNGISAEQIISYLTTHAHPQMRKNNPLLPVTVQDQIRLWELERNRLKSEEGYLYKDFGS
HADYEYVLNYAKQLDVVLWENTSRRCFFGSLDGHTNIRGFIERRTNGAV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgctaacgactcaatcagaaacattgacacctgaaagcatacctcacacattg
ctccctttccttcagtctcaatcgcaaaacaccctcacgcggttatatcaacgaccatcc
tcatgtttctcaatatttcgacttaccgggcctttggaaaggcaaatcataatgaacctg
ctatggctggagtctgccatacctatagctacaatgtccgcatgggttattcgtgagggg
aaaaagttatatgatgctgcattgacaacactcgccaatttacatattttaccacaatct
aatgtcaagcttgctctcaatccgacgttcaaagctagttttcggcaagctataactgga
ggagggaacagttcaagctttggcgtacctgccgaaaaagatgataagcgttcaacaaat
accgtcgagacactcgatgcatatgcgctggaaagatgggagaccattctccattatatg
gtgtcgtctggacaggggtcgttaccaacaaagccatcacaaggcgttctttatcttttg
caacgcagtggattgatgactcaaaaccacggttccgccttgcagattacatccgccggc
ttccaattcttacttcatacccctcatgaccaactatgggatctattactccagtatctt
catatggccgaggaaagacaaatggaccttgttgaagtgctcagcttcttgttcatgcta
tcgacgatggacttaggaagggaatattccactgaaggtctcagtgaaacacaaaaggct
atgttagaagacttgcgggattatggtctcgtatggcaacgcaaggctacgtctaaacga
ttcagtccaacgcgtctagcaactacgctaacctcgtcgtgtcctccccttccgacctcc
acggggaccagcgggggaccccagtcgcaaggattcatagtcctggaaaccaattacagg
atctatgcttatacagacaagcctctccaaaccgccgttctcaatcttttcatcaccatg
aaataccggtttcctaatcttgtcgtcggcatgcttacccgagagagcgtcaaaaaagct
ctttccaatggaatttctgctgaacagatcatcagttacctcactactcatgcccaccct
caaatgcgcaaaaataatccgctactgcctgtcactgtgcaggaccaaattagactctgg
gaattagagcggaatcgtctcaagtcagaagaaggatacctgtacaaagactttggctct
catgcggactacgaatacgtcctcaactacgccaagcaacttgacgtcgttctttgggaa
aacacctcgcgtaggtgtttctttggaagccttgatggacacacgaacatacgaggcttt
atcgagcgaaggacgaatggggcagtttag
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integrated database retrieval system
