Serpula lacrymans: SERLADRAFT_465378
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Entry
SERLADRAFT_465378 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sla
Serpula lacrymans
Pathway
sla03022
Basal transcription factors
sla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SERLADRAFT_465378
09124 Replication and repair
03420 Nucleotide excision repair
SERLADRAFT_465378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_465378
03400 DNA repair and recombination proteins [BR:
sla03400
]
SERLADRAFT_465378
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SERLADRAFT_465378
DNA repair and recombination proteins [BR:
sla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SERLADRAFT_465378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
18818887
NCBI-ProteinID:
XP_007317477
JGI:
465378
UniProt:
F8NV93
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MPSQRDGNYMNVDSDSDISLLGDGDGDYHLRGKNKGKGKAVDKKKKDKGKSKAKDQAYTW
EASYTRSWDTVQEDEAGSLQGAVEDWIARGRRRRLLAPAAAIRRTIIRHLILLLDLSTSM
MDRDMRPTRFDLTLEYAREFITEWFDQNPLGQIGVVGMRAGIGERIGEMSGNPQDVLKSI
ADRHRLEPTGEPSLQNAVDMARSSMSHLPTHSSREILVIFGSLTTCDPGNIHDTLDACVK
NKIRISVVALAAEMKICRELCDKTGGQFGVALNEGHFKDLLFELVPPPAQRAMTRAAGSG
ATNPAADLMMMGFPTRLPDTSPASLCVCHSEMKSEGFLCPRCMAKVCDVPTDCDICGLMI
VSSPHLARSYHHLFPVKPYDAIGSLADTPDAGLACHACARIFPTTALTSTSTEGMSPLNR
YRCPECHNDFCGDCDVFVHDVVHCCPGCGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctcaacgagatgggaactatatgaatgtagattcagattccgatatctctctc
ttgggggatggagacggagactaccacctgcgcggaaagaacaaagggaaaggcaaggct
gtcgataaaaagaagaaagacaaaggcaagagtaaagcgaaggatcaagcgtacacttgg
gaagcttcgtacacgcgttcgtgggatacagtacaagaagatgaagctggaagcttgcag
ggcgcagtagaggactggatagcaaggggtaggcgtcgaagattactggcacctgcagcc
gcaattcgtcgcacgattattcgacaccttattctcctactagacttatcgacgtctatg
atggatcgtgacatgaggccaacgagatttgatcttactttagagtatgccagagagttt
atcactgaatggtttgatcaaaatcccttgggtcaaattggcgtggtaggtatgagagct
ggtattggtgagcggataggagagatgtcaggaaatcctcaagatgtcctaaaatcaatt
gccgatagacatagactagaacccacgggcgaaccaagccttcaaaatgccgtcgatatg
gcgcgtagtagcatgagccatctccctacacactcatctcgagagatactcgttatattc
ggctctttgactacttgtgatcctggcaacattcacgatacgctggatgcatgcgtcaaa
aacaaaattcgcatctctgttgttgcgcttgccgccgagatgaagatatgcagggaactg
tgtgacaaaacaggcggtcaatttggggtcgccttgaacgaaggtcacttcaaagacctc
ttgttcgagcttgtccccccaccggcgcagcgtgctatgacccgtgctgcaggatcaggc
gcaacaaacccagcggctgatttgatgatgatgggctttcctactcgattgccagatacg
tctccagccagcttgtgtgtctgccattcggaaatgaagagcgaaggcttcctctgcccc
cgttgtatggcgaaagtctgcgatgttccgactgactgcgacatctgcggcctgatgatt
gttagctcgcctcatctggcacgaagctaccaccatttattccctgtcaagccgtacgat
gcgattgggtcacttgctgatacacccgatgctgggctggcttgtcacgcatgtgctcgt
atattcccgacgactgcactcacttcaacgtcgaccgaaggtatgagccccctaaatcgc
taccggtgccctgagtgccacaatgatttctgtggagactgcgatgtgtttgtgcacgac
gtcgtccattgctgccctggctgtggcaagtga
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