Sulfurimicrobium lacus skT11: SKTS_12380
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Entry
SKTS_12380 CDS
T06796
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
slac
Sulfurimicrobium lacus skT11
Brite
KEGG Orthology (KO) [BR:
slac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slac03400
]
SKTS_12380
Enzymes [BR:
slac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SKTS_12380
DNA repair and recombination proteins [BR:
slac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SKTS_12380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BCB26352
UniProt:
A0A6F8VBK9
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All DBs
Position
1253730..1256444
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AA seq
904 aa
AA seq
DB search
MSGNALRPSAADPLLSAAAREIVALERARLPNLSGVTVLLPNLHAAAEFGRILRDTAGVD
TLLLPRFATLRSLAEQQDTGRARLPVSRRQAMIYRALRDKDWFREGDLWHVSAELLRLFD
EITLSQVALPSTYEAFVHLLEQAYRARSGLPLQFEARLVHELWHAMSARGEGALDDATLY
HLQLAQLADMAAAPLYTVGLNDLVPMESAFFALYARSCPVRHFSVAAIEADPAGLTGLLS
AAWGESGQSEHLHDRASAFRDIASTSPLSGRHERLCLCGANSLEQEAETVAFRVGQWLAQ
GKTAIAVVVQDRLVARRARALLERAAVLVTDETGWTLSTTSASTVVMRWLDNLDSRFHYQ
DLLDLLKSPFIFTAWEPARRRHGVYRLEQLIRKHSVVSHLMRYRALAGDEAEVVELLDAL
GEAQKLLEKRKRRSLAEWQQGLLASLDVLQIRGGLQRDLAGDQLLQLLERLHLELAQDAT
AFSYSEWRQWLNQQLEEAVFRDASITSPVVFTHLAACRLRRFDGVVIAGADAAHLPGRGR
ESVFFNQAVRAQLGLPDRRAALETERQNLASLLVACPEVWVTWQARKNGEPNPLSPWFER
LEIFHVLAYGEGLKDSGFQPPAISFQPAVLAAHPAPVLPEQLVPATISASGYNSLVACPY
QFYARHALRLNELDEVSTALEKRDYGEYVHDILHRFHLVYPILSGQDTAVLQQVLRDISK
EVFTRAIEADFVSHAWALRWDASIPGYIAWQLARELEGWRWQEGEVERTLDIPLAGERQL
RLRGRLDRVDSKGAALAVLDYKTQNAEGLKKKLKQAGEDVQLPCYALLLGEMPQQAAFVA
VDEEDVGQVEAAEDIAVLAQANRVRLRDMFDALYRGASLPAQGISQACEYCEMRGLCRKD
YWNA
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaacgcgcttcgtccttccgctgcggacccgttgctcagcgccgctgcgcgc
gaaatcgtcgccctcgagcgcgcccgcctgcccaacctgagcggcgtgaccgtgctgctg
cccaatctccatgccgccgcggaattcggccgcatattgcgcgacacggccggggtggac
accttgctcctgccgcgcttcgccaccctgcggagcctcgcggagcaacaggacacgggc
cgggcacgcctgcccgtcagccgccgtcaggcgatgatctaccgggccttgcgcgacaag
gactggtttcgcgagggtgatttgtggcacgtcagcgccgagctgttgcgcctgttcgac
gaaatcaccttgagccaggtagcgcttccatccacttatgaagcgttcgtacatctgctg
gaacaggcctaccgggcgcgcagcgggctcccgctgcaattcgaggcccggctggtgcat
gagctgtggcacgccatgtccgccaggggggagggggcgctggacgatgccacgctctat
cacctgcagctggcgcagttggccgatatggcagctgcgccgctgtacaccgtggggctc
aacgacctcgtcccgatggagtcggcctttttcgcgctttatgcccgttcttgcccggtg
cgccatttttcggtcgctgcgattgaagccgatcccgccggtttgacgggcctgctgtct
gccgcctggggcgagtcggggcaaagtgaacacttgcacgaccgcgcgagcgctttccgc
gatattgcctcaaccagtcccttgtccggacggcatgaacggctttgcctgtgcggcgcc
aacagcctggaacaggaagccgagacagtcgccttccgcgtcggccagtggctggcgcaa
ggcaagacggccatcgccgtggtggtccaggaccggctcgtggcgcggcgcgcgcgtgcc
ctgctggagcgggcggcggtgctggtgaccgacgaaaccggctggaccctttccaccacc
agcgccagcacggtggtgatgcgctggctggacaacctggacagccgcttccattaccag
gatttgctcgatctgctcaaatccccgttcatcttcaccgcctgggaaccggcacggcgg
cgccatggggtgtaccgcctggaacagctgatccgcaagcacagcgtggtgtcgcacctg
atgcgctaccgcgcgctggccggggacgaggcggaagtcgtcgagttgctcgatgccctg
ggcgaggcgcaaaagctgctcgaaaaacgcaaaaggcgctcgctggccgagtggcagcaa
ggcttgctggcgagcctggatgtcttgcagattcgtggggggctgcagcgcgacctggcc
ggggaccagttgctccagttgctcgagcgcctgcatctcgaactggcccaggacgccact
gcattcagctattccgaatggcggcaatggctgaaccagcaactggaagaggcggttttt
cgcgacgccagcatcaccagcccggtggtgttcacccacctcgcggcctgtcgcctgcgc
cgcttcgacggagtggtcatcgccggcgccgatgcggcccatttgccggggcgggggcgc
gagagcgtattcttcaaccaggccgtcagagcacagctcggcttgcccgatcgtcgcgcc
gcattggaaaccgagcggcagaatctggcgtcgctgctggttgcctgcccggaggtgtgg
gtgacctggcaggcgcgcaagaacggcgagcccaatccgctcagcccgtggttcgagcgc
ctggaaattttccatgtgctggcttatggagaaggcttgaaggattctggctttcagcct
ccagccatcagctttcagcctgcagttctcgctgcgcaccctgccccggtgctgcctgag
cagcttgttcctgccaccatttccgccagcggttacaacagcctggtggcttgtccctac
cagttctacgcgcgtcacgccctgcgcctgaacgaactggacgaggtgtccaccgcgctg
gaaaagcgcgattacggcgagtacgtgcacgacatcctgcaccgtttccacctcgtctat
ccgattctgagtggccaggataccgccgtgttgcagcaggtgttgcgcgacatcagcaag
gaagtattcacccgcgccatcgaggcggatttcgtcagccatgcttgggccttgcgctgg
gacgcgtccatacccggctatatcgcctggcagctggcgcgggagctggaagggtggcgc
tggcaggaaggggaagtggagcgcacgctggacattcccctggctggcgaacggcagctc
aggctgcgcggtcggctggaccgggtggacagtaaaggcgccgcgctcgcggtgctcgac
tacaagacgcagaacgccgaggggctgaagaaaaagctcaagcaagccggcgaggacgtt
cagctgccctgttacgccctgttgctgggagaaatgccgcagcaggccgcgttcgtggcg
gtggacgaggaggacgtgggtcaggtcgaggcggccgaggacatcgccgtgctggcgcag
gccaaccgcgtgcgtctgcgcgacatgttcgatgcgctgtaccgcggcgcttcgctccct
gcccagggcatatcccaggcctgcgaatactgcgaaatgcgcggcctgtgccgcaaggac
tactggaatgcatga
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