Seriola lalandi dorsalis (Yellowtail amberjack): 111645993
Help
Entry
111645993 CDS
T06058
Symbol
lig4
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111645993 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slal03400
]
111645993 (lig4)
Enzymes [BR:
slal01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111645993 (lig4)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111645993 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
111645993
NCBI-ProteinID:
XP_023251124
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MEGTSRSDAAGQLSVAAQVPFLHLCTTLEKIQKSKLRPDKSKILGDFIASWRKFHSALHK
DKPKTTDSFYPAMRLIVPSFERERMAYGIKENMLAKLYIDVLGLPKNGPEANKLLNYRAP
STSQGEAGDFAGMAYFVLKKRCTSQGNLSIKEVNDFLDSVAMNNASNQKDLVKKSLLHLI
TQSLALEQKWLIRMILXDMKLGISKETVLQVFHPDAAELYNVNTDLNKVCQQLHNPSVSL
SEVSIGLFSAFKPMLAGVANIRNVEKQMGNSPFYIQTKLDGERIQLHKDGDVYKYFSRNA
FEYTQQFGSSALEGSLTPYIHNVFKSHVVNCILDGEMMAYNPSTENFMQKGSKFDIKRLM
EDSELQTCFCVFDVLLVNDQKLGKETLKKRYETIQTVFTPVKGRIHLVPQTEARTVQEVV
NALNDAIDSREEGIMVKDPLSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKGR
RGGMMSHFLCAIAEAPKPGEKPSLFHSFCRIGSGYTMKELYDLGLKLAKHWKVYRKNDPP
ASILCGTEKPEAYIEPCNSVIVQVKAAEIVGSDMYKTNCTLRFPRIEKIRDDKEWHQCMT
LAELDQFRSKASGKLASRHLHINDNEPQKKKRKVAAKPKKVVGLIDHFKPQDLSGVTKET
DMFEDVEFCILNGTEDHPKAELEKGVARCGGIVVQNPGRDTYCVIAGMENMRVKNLILSN
QHDVVWASWLLECLDQKEVVPWQPHHMIHMSPSTREHFAKEYDSYGDSYFVDTDEQQLRE
VFGRISGGGVAAAAAAAVDVAQVEQRYSWDDLPTSMFRPFTVYMDSYADVGDPETAIPAT
CLDIRALEFRYHGGTVVQELEEGVSHVIITEETRLLDFKTLRRRFRKKFKIVKDSWVTDS
IEAGYVMNDDNYLV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacttccagaagtgacgctgctggccagctgtctgtcgcagcacaggttcct
ttccttcacctgtgtaccactttagagaaaatccagaagtctaaactccgtccagataaa
tccaagatccttggggatttcattgcatcatggaggaagtttcattctgccctccacaag
gacaagcccaaaacaacagactctttctacccagctatgcgcctcatagtcccctctttt
gaacgcgagcggatggcatatggcatcaaagagaacatgttagctaaactgtacatcgac
gtactaggccttccaaagaatggcccagaggccaataaactgctgaactaccgagctcca
tctacatcccaaggagaagctggagactttgcgggcatggcgtactttgtgctgaagaaa
cggtgcaccagccaaggcaacctcagcatcaaagaagtcaatgactttctggactcggtg
gccatgaacaacgccagcaatcagaaggatcttgtgaaaaagagtctcctgcacctcatc
acccagagcttggctctagagcaaaaatggctcatcagaatgatcctgnaagacatgaag
ctcgggatcagcaaagaaactgttctccaggttttccacccggacgctgctgagctctac
aatgtcaacacagacttgaacaaggtgtgccagcagctccacaacccgtctgtttcttta
agtgaagtctccattggactcttctctgccttcaagcccatgttggcaggtgtggctaac
atccgcaatgtggagaaacagatgggcaacagccccttttacatccagaccaagctggac
ggggagcgtattcagctgcacaaagatggagacgtgtacaaatactttagccggaatgct
tttgagtacacgcagcagtttggatcatctgcacttgagggctcactaactccttacatc
cacaatgttttcaaaagccacgtcgtgaactgcatcctcgacggtgagatgatggcgtac
aacccaagcacagagaacttcatgcagaaagggagcaagttcgacatcaagaggctgatg
gaggactccgagttacagacgtgcttctgcgtgtttgacgtgttgttagtcaatgaccag
aagcttggcaaggaaacactgaagaaacgctacgaaaccattcagacagttttcacccca
gtcaagggaaggattcacctggtgccacagaccgaagccagaaccgtgcaagaagtggtg
aacgccctcaatgatgccatagacagcagagaagaagggatcatggtgaaggatccgtta
tccatctacaaacctgacaagcgaggggagggatggctgaaaataaagccagaatacgtt
gatggattgatggatgagcttgacctgctgattgtcggcggctactgggggaaagggaga
cggggtggtatgatgtcccatttcttatgtgccattgctgaagctccaaagcctggcgag
aaaccttcacttttccacagcttctgccgcatcggctctgggtataccatgaaggagctg
tatgacctcggtttgaagctagccaagcactggaaagtttaccggaagaacgacccgccg
gcgtccatcctgtgcggcacagagaagccagaagcctacatcgaaccctgcaactctgtc
atcgtccaagtcaaggcggccgagatagttgggagcgacatgtataaaaccaactgtacc
ctccgcttccccaggatcgagaagatccgtgatgacaaggagtggcaccagtgcatgact
ctggcagagctcgatcagttccgcagcaaggcgtcggggaaactcgcctctcgccacctt
cacatcaacgacaacgaaccgcaaaagaagaagcgcaaggtggcagccaagcccaagaag
gtggtcgggctcatcgaccacttcaagcctcaggacctctccggggttaccaaggagacg
gatatgtttgaagatgtggagttctgcatcctgaacggcaccgaggatcaccccaaggcc
gagctggagaagggcgtggccaggtgtggaggaatcgtggttcaaaacccaggacgggac
acctactgcgtgattgccggcatggagaacatgcgtgtgaagaacctgattttgtccaac
cagcacgacgtggtttgggcctcatggctgctggagtgcctggaccagaaggaagtggtg
ccatggcaaccacaccacatgatccacatgtcgccctccaccagggaacactttgccaag
gagtacgacagctacggcgacagctacttcgtggacacagacgagcaacagttgcgagag
gtcttcggcaggatcagcggtggtggcgtggcggcggcagcggctgcggctgtggacgtg
gcgcaggtcgagcagcgttacagctgggacgaccttcccaccagtatgttcagacccttc
acagtttacatggacagctatgctgacgtaggagaccctgaaactgccatacctgccacc
tgtttggacatccgggcgctggagtttcgataccacggaggcacagtggtgcaggagttg
gaggaaggagtctctcacgtcatcatcacagaggaaacacgacttctggatttcaagact
ctgaggcggcgctttaggaagaagtttaagatcgtaaaagactcatgggtgactgattca
atcgaagcagggtatgtgatgaatgacgataactacttggtttaa
DBGET
integrated database retrieval system
