Seriola lalandi dorsalis (Yellowtail amberjack): 111650225
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Entry
111650225 CDS
T06058
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slal01002
]
111650225 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111650225 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slal04147
]
111650225 (usp13)
Enzymes [BR:
slal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111650225 (usp13)
Peptidases and inhibitors [BR:
slal01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111650225 (usp13)
Ubiquitin system [BR:
slal04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111650225 (usp13)
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111650225 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
111650225
NCBI-ProteinID:
XP_023255845
Ensembl:
ENSSLDG00000017529
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALDHYRETNYPLAVK
LDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKRTENGHHTDNNARPRVSEW
EVIQESGMKLKAVYGSGYTGIKNLGNSCYLGTVMQVLFSIPDFQRMYVGNLQRIYDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEYKVLNWHQQKGISPRMLKALV
SRGHPEFSSNRQQDAQDLLLHIINLVERNSAGSENPSDVFRFLVEERVQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELLAYEAKRKDAEENMRAPPQPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLLVQIKKFTFGVDWVPKKLDLAIDVPDFLDLNR
LRATGLQASEEELPDLMPPIVLPEDTRDNSMSSIDSPEIDEAAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMIDPGPSTSDSPMGATPLANSPPEESI
AILTSMGFPRNHSIQALKATNNNLERALDWIFTHPEEEESDALSDMADTEPNDNTFSNAN
SHSDSTLSPDRDTSGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYHRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctaggagagctgctggtcccgtacatgcccaccatcagagtccccagg
acaggagacagggttttcaagagcgagtgtgccttttccttcgactctcccgagtctgag
ggtggcctgtatgtgtgtatgaacacattccttggctttggacgagaacatgtggagaga
cactaccgcaaaacaggacagagtgtttacatgcacctcaagcgacatgtcaaagagaaa
gccacaggagccgcaggaggcgccatccccagacgaagaaacggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggagaggactatgaatacgaagacgaggccaagctc
gtcatttttccagaccacttcgagatccccttaccaaatattgaggagttgcccgctctg
gtgaccatcgcctgtgacgcagtgctcaatgcaccatcagcttacaagaagcaagagcct
gaatcctgggaggaggagatccaggtatcccgacatgccaggagcctcagacagctggat
aatggggtcagaatcccacccagtggctggaagtgtcagaagtgcgagatgagagaaaac
ctttggctgaacctgacggatggagcagtgctctgtgggaagtggttctttgacgggagt
ggaggtaacggccatgctctggaccactacagagagaccaactacccactggctgtcaaa
ctggacaccatcaccccagatggagcagatgtctattcgtttgaagaagaagaagccgtg
ttggacccccacatatcagaacacttgtcacactttggaatagacatgcttcagatgcag
aaaagaacagagaatgggcaccacacagacaacaacgcacggccgcgggtcagtgaatgg
gaggtgatccaggagtcgggcatgaagctgaaggcggtctacggttctggttacacaggc
atcaaaaacctgggcaacagctgctacctcggcacagtaatgcaggtcctcttcagcatc
ccagacttccagaggatgtatgtgggtaatcttcagaggatatatgactattcacccctt
gaccccacccaagactttgccacacaaatggctaaactgggacacggactgctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaatac
aaggtattaaactggcaccagcagaagggcatctccccccggatgttgaaggccctggtc
agcaggggacacccagagttttcctcaaacagacaacaagatgcccaggacctcctcctg
cacatcatcaacctagtggagaggaacagtgcaggctcagagaatccaagcgacgtcttc
cgcttcctggtggaggagcgagttcagtgctgccagacacgtcgggtgcgatacactcag
cgggtggactactgcatccaactgccagccccaatcgaggctgccaccaatcgagaggag
ctgctggcatacgaggccaagcggaaggatgctgaggagaacatgagggctccacctcaa
cctgtgagagcacggatccccttcaccgcctgcctgcaggccttcacagagccagagaac
gtcccagacttctggagctcagcgctgcaggccaagtcagctggagtcaaaacttcccgt
tttgcctccttcccagagtatctgctcgtgcagatcaagaaattcacatttggagttgat
tgggtgccgaagaaactagacttggccatagatgttccagacttcctcgatctgaaccgg
ctgcgggccacagggctgcaggcaagtgaagaggagctgcctgatctcatgcccccaatc
gtgctacctgaagacaccagagataactcaatgagctccatagactctcctgaaatagac
gaggcagcagtaatgcagctggcagagatgggcttcccgctggaggcctgtaggaaggcg
gtctactacacaggcaacatgggccccgagatggcattcaactggatcatagcccacatg
gaggagcctgactttgcagaacctcttactctgccctccatgatagatcctggtccctcc
accagtgacagccccatgggtgccaccccactggccaactcgccccctgaggaaagcatc
gccatcctcacatctatgggcttcccccgcaatcacagtattcaggcacttaaagccacg
aacaataacctggaacgagcacttgactggatcttcacccacccggaggaggaggagagt
gacgccctgtcagacatggctgacacagagcccaatgacaacactttctccaacgccaac
tcgcacagcgactccacgctgtctccagacagagacacgtcaggcccacgtgtcaaagac
ggaccgggacgttatgagctctttgccttcatcagccacatgggagcatccacaatgtct
gggcattatgtttgtcacatcaaaaaggagggaaggtgggtgatctacaacgaccacaaa
gtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccaccgactg
tctagcagttaa
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integrated database retrieval system
