Seriola lalandi dorsalis (Yellowtail amberjack): 111659606
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Entry
111659606 CDS
T06058
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111659606
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111659606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-RING_2
zf-RING_10
Perilipin
Gp58
Exonuc_VII_L
PRP1_N
Motif
Other DBs
NCBI-GeneID:
111659606
NCBI-ProteinID:
XP_023268376
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAQRGIQMDREKLCCSICLDLLKDPVTIPCGHNYCMSCIKSHWDQEDQRRIHSCPQCRQD
FIPRPVLVKNTMLAELVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAVKSCLQCL
VSYCEQHLQPHYESPAFKQHKLVDASKKLQENICSRHDEVMKIFCRTDQQCICYLCSMDE
HKSHDTVSAAAERADKQGDLILNQQKIQQRIQDREEVVKVLQQEVEATNRSADKAVKDCD
EIFTQLIRLMEKRSSDLKQQIRSQQKTEVSRVKALQEKLQQEITELKRKDDELQQMSRTE
DHIQFLHNYPSLSNLADSPDSPSINIRPLRYFEDVMAAASEARDKLQDILKEEWTKISLT
VADVDILLPPAEPRTRAEFLRYSQQITLNPNTANTRLLLSEGNRKATVTFEEQFYSPNLE
RFIHLFQVLSRESLTRPCYWEVEWSGLQVSVAVTYKDISRTGDESLFGNNDKSWALACFN
KSYEFRHDSISTLVSGPQSSRVGVYLDHKAGVLSFYSVSESMTLLHRVQTTFTQPLYAGL
WFVGAGSTAVCSAQLSLC
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcgaggaattcagatggaccgggaaaaactctgctgttccatctgtttggat
ctactgaaggatccagtgactattccctgtggacacaactactgtatgagctgtattaaa
agtcactgggatcaagaggatcagaggaggatccacagctgtcctcagtgcagacaggat
ttcataccaagacctgtcctggtgaaaaacaccatgttagcagagttagtggaggaacta
aagaagactggactccaagctgctccagctgatcactgctatgccggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagctgtcaaatcctgtctgcagtgtctg
gtctcttactgtgagcagcacctccagcctcactatgaatctcctgcctttaaacaacat
aaactggtcgacgcctcaaagaagctccaggagaacatctgctctcgtcatgatgaagtg
atgaagattttctgccgcactgatcagcagtgtatctgttatctctgctccatggatgaa
cataaaagccacgacactgtctcagctgcagcggaaagggctgacaagcagggagatctc
atactgaatcagcaaaaaatccagcagagaatccaggacagagaggaggtcgtaaaggtg
cttcagcaggaggtggaggctaccaatcgctctgctgataaagcagtgaaggactgtgat
gagatcttcactcagctgatccgtctcatggagaaaagaagctctgatctgaagcagcag
atcagatcgcagcagaaaactgaggtcagtcgagtcaaagcgcttcaggagaaactgcag
caggagatcactgagctgaagaggaaagatgatgagctgcagcaaatgtcacgcacagaa
gatcacatccagttcctacacaattacccatcgctttcaaatctcgctgactctccagac
tcacccagcatcaatatccgtcctctgcgatactttgaggatgtgatggcagctgcgtca
gaagccagagacaaactccaggacattcttaaagaggaatggaccaagatctcactgact
gtggctgatgtggacattttactgccgccagcagagcccaggaccagagctgaattctta
agatattcccaacaaatcacactgaatccaaacacggcaaatacacggctgctattatct
gaggggaacagaaaagcaacagtgacgtttgaagaacagttttattctcctaacctggaa
agattcatccacttgtttcaggtcctgagcagagagagtctgaccagaccttgttactgg
gaggtggagtggagtgggttacaagtttcagtagcagtcacatacaaggacatcagcaga
acaggagatgaaagtttgtttggaaacaatgataagtcttgggctttagcatgtttcaac
aaaagttatgaattcagacatgacagcatcagcactctcgtctcaggccctcagtcctcc
agagtaggagtgtacctggatcacaaagcaggtgttctgtccttctacagcgtttctgaa
tccatgactctcctgcacagagtccagaccacattcactcagcctctctacgctggactt
tggtttgttggtgcaggatccactgctgtttgttccgctcagctctccttatgttga
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