Seriola lalandi dorsalis (Yellowtail amberjack): 111664540
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Entry
111664540 CDS
T06058
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111664540
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111664540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Calcipressin
Motif
Other DBs
NCBI-GeneID:
111664540
NCBI-ProteinID:
XP_023274945
Ensembl:
ENSSLDG00000023983
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMDRDRELDTMAGVHTNPGGAPAAVRGMKRGDPEPDGQTAAAL
VDSAGAECKRPRIDGSGGIGEVGQNNDPLTLGYHGYPSHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGGAANSATNAANSLSVQSDGSSQIDGQ
SGVGSGGGGGGGSVGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE
RGSKGFGFVTFESSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGLA
ALPYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAASTAATFRGAHLRGRARPVYSAVR
AAVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYSDSYG
RVYTADPYHAALAPAAYGVGAMVSPYVF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatcaatcatgctgccagtgtcccggggtctcatggac
cgggatagagagctggacaccatggccggggtgcacaccaacccgggcggcgctcctgca
gctgtccggggcatgaagcgaggagacccggagcctgacggacagacggcggcggctctg
gtggactcggccggggcggagtgcaagcgtccccggatcgacggctcaggaggaatcggc
gaggttggtcagaataatgaccctttgacccttggttaccacggctacccgtctcacagt
cagggctctcaggatagtgctggcggtcaggagggactcgtacccccacctttctccgcg
ttccctccacctccaccgccgcctccccaaaacggcctggccctggattacgggggcagt
ctgtacgcagcgggggccgtccagggccccgtggaagctggcggagcagcgaacagcgcc
accaacgccgccaacagcctcagtgtccaatccgatgggtcctcccagattgacggacag
tcaggggttggctcgggaggaggaggtggtggggggagtgtcggggatgactcagacgcc
aaggggacccccaaacgcctccacgtgtccaacatccccttccgtttccgagaccccgac
ctacggcagatgtttgggcaatttggcaaaatcctcgatgtcgagataatttttaatgag
aggggatccaagggcttcggttttgtaacattcgagtcgagtgcagatgcagagagggcc
agagagaagcttcacggtacactggtggaaggacgtaaaatcgaggtcaataatgccaca
gccagagtgatgacgaacaagaagatgactacaccgtactctaacggagagggcctcgct
gctcttccatatgctggatggaaattgagtcccatggttggcgcaatgtacagtcctgag
ctctatacagtaccagggtttccatacccagcagcagcagcagcagctgcttctaccgct
gcaacgtttcggggcgctcatctccggggtcgtgcacggcccgtctacagtgcagtcagg
gcagctgtgccacaacctgccatccctacatacccgggtgtgatggcctatcaggatggt
ttttacggtgcagccgatctctatggtggctatgcagcgtatcgttacgcccagccggct
gcggtagcgacccccgcagcagcagcggctgcagcagcagcttacagtgacagctacgga
cgagtttacacggcagacccctaccatgctgcactcgccccagctgcctatggtgttgga
gccatggtaagtccatatgttttctaa
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